TopFIND 4.0

A9LNK9: 30-kDa cleavage and polyadenylation specificity factor 30 {ECO:0000303|PubMed:18479511}

General Information

Protein names
- 30-kDa cleavage and polyadenylation specificity factor 30 {ECO:0000303|PubMed:18479511}
- 3.1.21.- {ECO:0000269|PubMed:17576667}
- Protein OXIDATIVE STRESS TOLERANT 6 {ECO:0000303|PubMed:18545667}
- Zinc finger CCCH domain-containing protein 11
- AtC3H11
Gene names CPSF30
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID A9LNK9

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MEDADGLSFD FEGGLDSGPV QNTASVPVAP PENSSSAAVN VAPTYDHSSA TVAGAGRGRS 
        70         80         90        100        110        120 
FRQTVCRHWL RGLCMKGDAC GFLHQFDKAR MPICRFFRLY GECREQDCVY KHTNEDIKEC 
       130        140        150        160        170        180 
NMYKLGFCPN GPDCRYRHAK LPGPPPPVEE VLQKIQQLTT YNYGTNRLYQ ARNVAPQLQD 
       190        200        210        220        230        240 
RPQGQVPMQG QPQESGNLQQ QQQQQPQQSQ HQVSQTLIPN PADQTNRTSH PLPQGVNRYF 
       250        260        270        280        290        300 
VVKSNNRENF ELSVQQGVWA TQRSNEAKLN EAFDSVENVI LIFSVNRTRH FQGCAKMTSR 
       310        320        330        340        350        360 
IGGYIGGGNW KHEHGTAQYG RNFSVKWLKL CELSFHKTRN LRNPYNENLP VKISRDCQEL 
       370        380        390        400        410        420 
EPSVGEQLAS LLYLEPDSEL MAISIAAEAK REEEKAKGVN PESRAENPDI VPFEDNEEEE 
       430        440        450        460        470        480 
EEEDESEEEE ESMAGGPQGR GRGRGIMWPP QMPLGRGIRP MPGMGGFPLG VMGPGDAFPY 
       490        500        510        520        530        540 
GPGGYNGMPD PFGMGPRPFG PYGPRFGGDF RGPVPGMMFP GRPPQQFPHG GYGMMGGGRG 
       550        560        570        580        590        600 
PHMGGMGNAP RGGRPMYYPP ATSSARPGPS NRKTPERSDE RGVSGDQQNQ DASHDMEQFE 
       610        620        630    
VGNSLRNEES ESEDEDEAPR RSRHGEGKKR R

Isoforms

- Isoform 2 of Cleavage and polyadenylation specificity factor CPSF30 - Isoform 2 of 30-kDa cleavage and polyadenylation specificity factor 30

Sequence View

        10         20         30         40         50         60 
MEDADGLSFD FEGGLDSGPV QNTASVPVAP PENSSSAAVN VAPTYDHSSA TVAGAGRGRS 
        70         80         90        100        110        120 
FRQTVCRHWL RGLCMKGDAC GFLHQFDKAR MPICRFFRLY GECREQDCVY KHTNEDIKEC 
       130        140        150        160        170        180 
NMYKLGFCPN GPDCRYRHAK LPGPPPPVEE VLQKIQQLTT YNYGTNRLYQ ARNVAPQLQD 
       190        200        210        220        230        240 
RPQGQVPMQG QPQESGNLQQ QQQQQPQQSQ HQVSQTLIPN PADQTNRTSH PLPQGVNRYF 
       250        260        270        280        290        300 
VVKSNNRENF ELSVQQGVWA TQRSNEAKLN EAFDSVENVI LIFSVNRTRH FQGCAKMTSR 
       310        320        330        340        350        360 
IGGYIGGGNW KHEHGTAQYG RNFSVKWLKL CELSFHKTRN LRNPYNENLP VKISRDCQEL 
       370        380        390        400        410        420 
EPSVGEQLAS LLYLEPDSEL MAISIAAEAK REEEKAKGVN PESRAENPDI VPFEDNEEEE 
       430        440        450        460        470        480 
EEEDESEEEE ESMAGGPQGR GRGRGIMWPP QMPLGRGIRP MPGMGGFPLG VMGPGDAFPY 
       490        500        510        520        530        540 
GPGGYNGMPD PFGMGPRPFG PYGPRFGGDF RGPVPGMMFP GRPPQQFPHG GYGMMGGGRG 
       550        560        570        580        590        600 
PHMGGMGNAP RGGRPMYYPP ATSSARPGPS NRKTPERSDE RGVSGDQQNQ DASHDMEQFE 
       610        620        630    
VGNSLRNEES ESEDEDEAPR RSRHGEGKKR R         10         20         30         40         50         60 
MEDADGLSFD FEGGLDSGPV QNTASVPVAP PENSSSAAVN VAPTYDHSSA TVAGAGRGRS 
        70         80         90        100        110        120 
FRQTVCRHWL RGLCMKGDAC GFLHQFDKAR MPICRFFRLY GECREQDCVY KHTNEDIKEC 
       130        140        150        160        170        180 
NMYKLGFCPN GPDCRYRHAK LPGPPPPVEE VLQKIQQLTT YNYGTNRLYQ ARNVAPQLQD 
       190        200        210        220        230        240 
RPQGQVPMQG QPQESGNLQQ QQQQQPQQSQ HQVSQTLIPN PADQTNRTSH PLPQGVNRYF 
       250        260        270        280        290        300 
VVKSNNRENF ELSVQQGVWA TQRSNEAKLN EAFDSVENVI LIFSVNRTRH FQGCAKMTSR 
       310        320        330        340        350        360 
IGGYIGGGNW KHEHGTAQYG RNFSVKWLKL CELSFHKTRN LRNPYNENLP VKISRDCQEL 
       370        380        390        400        410        420 
EPSVGEQLAS LLYLEPDSEL MAISIAAEAK REEEKAKGVN PESRAENPDI VPFEDNEEEE 
       430        440        450        460        470        480 
EEEDESEEEE ESMAGGPQGR GRGRGIMWPP QMPLGRGIRP MPGMGGFPLG VMGPGDAFPY 
       490        500        510        520        530        540 
GPGGYNGMPD PFGMGPRPFG PYGPRFGGDF RGPVPGMMFP GRPPQQFPHG GYGMMGGGRG 
       550        560        570        580        590        600 
PHMGGMGNAP RGGRPMYYPP ATSSARPGPS NRKTPERSDE RGVSGDQQNQ DASHDMEQFE 
       610        620        630    
VGNSLRNEES ESEDEDEAPR RSRHGEGKKR R



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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    A9LNK9-1-unknown MEDADG... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    A9LNK9-1-unknown MEDADG... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt71581

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...GKKRR 631 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)