TopFIND 4.0

O48652: (6-4)DNA photolyase

General Information

Protein names
- (6-4)DNA photolyase
- 4.1.99.13
- Protein UV repair defective 3

Gene names UVR3
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID O48652

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MQRFCVCSPS SYRLNPITSM ATGSGSLIWF RKGLRVHDNP ALEYASKGSE FMYPVFVIDP 
        70         80         90        100        110        120 
HYMESDPSAF SPGSSRAGVN RIRFLLESLK DLDSSLKKLG SRLLVFKGEP GEVLVRCLQE 
       130        140        150        160        170        180 
WKVKRLCFEY DTDPYYQALD VKVKDYASST GVEVFSPVSH TLFNPAHIIE KNGGKPPLSY 
       190        200        210        220        230        240 
QSFLKVAGEP SCAKSELVMS YSSLPPIGDI GNLGISEVPS LEELGYKDDE QADWTPFRGG 
       250        260        270        280        290        300 
ESEALKRLTK SISDKAWVAN FEKPKGDPSA FLKPATTVMS PYLKFGCLSS RYFYQCLQNI 
       310        320        330        340        350        360 
YKDVKKHTSP PVSLLGQLLW REFFYTTAFG TPNFDKMKGN RICKQIPWNE DHAMLAAWRD 
       370        380        390        400        410        420 
GKTGYPWIDA IMVQLLKWGW MHHLARHCVA CFLTRGDLFI HWEQGRDVFE RLLIDSDWAI 
       430        440        450        460        470        480 
NNGNWMWLSC SSFFYQFNRI YSPISFGKKY DPDGKYIRHF LPVLKDMPKQ YIYEPWTAPL 
       490        500        510        520        530        540 
SVQTKANCIV GKDYPKPMVL HDSASKECKR KMGEAYALNK KMDGKVDEEN LRDLRRKLQK 
       550    
DEHEESKIRN QRPKLK

Isoforms

- Isoform 2 of (6-4)DNA photolyase

Sequence View

        10         20         30         40         50         60 
MQRFCVCSPS SYRLNPITSM ATGSGSLIWF RKGLRVHDNP ALEYASKGSE FMYPVFVIDP 
        70         80         90        100        110        120 
HYMESDPSAF SPGSSRAGVN RIRFLLESLK DLDSSLKKLG SRLLVFKGEP GEVLVRCLQE 
       130        140        150        160        170        180 
WKVKRLCFEY DTDPYYQALD VKVKDYASST GVEVFSPVSH TLFNPAHIIE KNGGKPPLSY 
       190        200        210        220        230        240 
QSFLKVAGEP SCAKSELVMS YSSLPPIGDI GNLGISEVPS LEELGYKDDE QADWTPFRGG 
       250        260        270        280        290        300 
ESEALKRLTK SISDKAWVAN FEKPKGDPSA FLKPATTVMS PYLKFGCLSS RYFYQCLQNI 
       310        320        330        340        350        360 
YKDVKKHTSP PVSLLGQLLW REFFYTTAFG TPNFDKMKGN RICKQIPWNE DHAMLAAWRD 
       370        380        390        400        410        420 
GKTGYPWIDA IMVQLLKWGW MHHLARHCVA CFLTRGDLFI HWEQGRDVFE RLLIDSDWAI 
       430        440        450        460        470        480 
NNGNWMWLSC SSFFYQFNRI YSPISFGKKY DPDGKYIRHF LPVLKDMPKQ YIYEPWTAPL 
       490        500        510        520        530        540 
SVQTKANCIV GKDYPKPMVL HDSASKECKR KMGEAYALNK KMDGKVDEEN LRDLRRKLQK 
       550    
DEHEESKIRN QRPKLK



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini

    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    O48652-1-unknown MQRFCV... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    O48652-1-unknown MQRFCV... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt94027

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...RPKLK 556 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)