TopFIND 4.0

Q9XF88: Chlorophyll a-b binding protein CP29.2, chloroplastic

General Information

Protein names
- Chlorophyll a-b binding protein CP29.2, chloroplastic
- LHCB4.2
- LHCII protein 4.2
Gene names LHCB4.2
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9XF88

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MAATSTAAAA SSIMGTRVVS DISSNSSRFT ARFGFGTKKA SPKKAKTVIS DRPLWFPGAK 
        70         80         90        100        110        120 
SPEYLDGSLV GDYGFDPFGL GKPAEYLQFD LDSLDQNLAK NLYGEVIGTR TEAVDPKSTP 
       130        140        150        160        170        180 
FQPYSEVFGL QRFRECELIH GRWAMLATLG AITVEWLTGV TWQDAGKVEL VDGSSYLGQP 
       190        200        210        220        230        240 
LPFSISTLIW IEVLVIGYIE FQRNAELDSE KRLYPGGKFF DPLGLASDPV KKAQLQLAEI 
       250        260        270        280    
KHARLAMVGF LGFAVQAAAT GKGPLNNWAT HLSDPLHTTI IDTFSSS

Isoforms

- Isoform 2 of Chlorophyll a-b binding protein CP29.2, chloroplastic

Sequence View

        10         20         30         40         50         60 
MAATSTAAAA SSIMGTRVVS DISSNSSRFT ARFGFGTKKA SPKKAKTVIS DRPLWFPGAK 
        70         80         90        100        110        120 
SPEYLDGSLV GDYGFDPFGL GKPAEYLQFD LDSLDQNLAK NLYGEVIGTR TEAVDPKSTP 
       130        140        150        160        170        180 
FQPYSEVFGL QRFRECELIH GRWAMLATLG AITVEWLTGV TWQDAGKVEL VDGSSYLGQP 
       190        200        210        220        230        240 
LPFSISTLIW IEVLVIGYIE FQRNAELDSE KRLYPGGKFF DPLGLASDPV KKAQLQLAEI 
       250        260        270        280    
KHARLAMVGF LGFAVQAAAT GKGPLNNWAT HLSDPLHTTI IDTFSSS



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Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9XF88-1-unknown MAATST... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt69418
    Q9XF88-32-Acetylation RFGFGT... 32 acetylation- inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9XF88-32-Acetylation RFGFGT... 32 acetylation- inferred from isoform by sequence similarity unknown TopFIND inferred from TNt114944

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...TFSSS 287 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)