TopFIND 4.0

A0AVF1: Intraflagellar transport protein 56 {ECO:0000250|UniProtKB:Q8BS45}

General Information

Protein names
- Intraflagellar transport protein 56 {ECO:0000250|UniProtKB:Q8BS45}
- Tetratricopeptide repeat protein 26 {ECO:0000312|HGNC:HGNC:21882}
- TPR repeat protein 26 {ECO:0000312|HGNC:HGNC:21882}
Gene names TTC26
Organism Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID A0AVF1

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MMLSRAKPAV GRGVQHTDKR KKKGRKIPKL EELLSKRDFT GAITLLEFKR HVGEEEEDTN 
        70         80         90        100        110        120 
LWIGYCAFHL GDYKRALEEY ENATKEENCN SEVWVNLACT YFFLGMYKQA EAAGFKASKS 
       130        140        150        160        170        180 
RLQNRLLFHL AHKFNDEKKL MSFHQNLQDV TEDQLSLASI HYMRSHYQEA IDIYKRILLD 
       190        200        210        220        230        240 
NREYLALNVY VALCYYKLDY YDVSQEVLAV YLQQIPDSTI ALNLKACNHF RLYNGRAAEA 
       250        260        270        280        290        300 
ELKSLMDNAS SSFEFAKELI RHNLVVFRGG EGALQVLPPL VDVIPEARLN LVIYYLRQDD 
       310        320        330        340        350        360 
VQEAYNLIKD LEPTTPQEYI LKGVVNAALG QEMGSRDHMK IAQQFFQLVG GSASECDTIP 
       370        380        390        400        410        420 
GRQCMASCFF LLKQFDDVLI YLNSFKSYFY NDDIFNFNYA QAKAATGNTS EGEEAFLLIQ 
       430        440        450        460        470        480 
SEKMKNDYIY LSWLARCYIM NKKPRLAWEL YLKMETSGES FSLLQLIAND CYKMGQFYYS 
       490        500        510        520        530        540 
AKAFDVLERL DPNPEYWEGK RGACVGIFQM IIAGREPKET LREVLHLLRS TGNTQVEYMI 
       550    
RIMKKWAKEN RVSI

Isoforms

- Isoform 2 of Tetratricopeptide repeat protein 26 - Isoform 3 of Tetratricopeptide repeat protein 26 - Isoform 2 of Intraflagellar transport protein 56 - Isoform 3 of Intraflagellar transport protein 56

Sequence View

        10         20         30         40         50         60 
MMLSRAKPAV GRGVQHTDKR KKKGRKIPKL EELLSKRDFT GAITLLEFKR HVGEEEEDTN 
        70         80         90        100        110        120 
LWIGYCAFHL GDYKRALEEY ENATKEENCN SEVWVNLACT YFFLGMYKQA EAAGFKASKS 
       130        140        150        160        170        180 
RLQNRLLFHL AHKFNDEKKL MSFHQNLQDV TEDQLSLASI HYMRSHYQEA IDIYKRILLD 
       190        200        210        220        230        240 
NREYLALNVY VALCYYKLDY YDVSQEVLAV YLQQIPDSTI ALNLKACNHF RLYNGRAAEA 
       250        260        270        280        290        300 
ELKSLMDNAS SSFEFAKELI RHNLVVFRGG EGALQVLPPL VDVIPEARLN LVIYYLRQDD 
       310        320        330        340        350        360 
VQEAYNLIKD LEPTTPQEYI LKGVVNAALG QEMGSRDHMK IAQQFFQLVG GSASECDTIP 
       370        380        390        400        410        420 
GRQCMASCFF LLKQFDDVLI YLNSFKSYFY NDDIFNFNYA QAKAATGNTS EGEEAFLLIQ 
       430        440        450        460        470        480 
SEKMKNDYIY LSWLARCYIM NKKPRLAWEL YLKMETSGES FSLLQLIAND CYKMGQFYYS 
       490        500        510        520        530        540 
AKAFDVLERL DPNPEYWEGK RGACVGIFQM IIAGREPKET LREVLHLLRS TGNTQVEYMI 
       550    
RIMKKWAKEN RVSI         10         20         30         40         50         60 
MMLSRAKPAV GRGVQHTDKR KKKGRKIPKL EELLSKRDFT GAITLLEFKR HVGEEEEDTN 
        70         80         90        100        110        120 
LWIGYCAFHL GDYKRALEEY ENATKEENCN SEVWVNLACT YFFLGMYKQA EAAGFKASKS 
       130        140        150        160        170        180 
RLQNRLLFHL AHKFNDEKKL MSFHQNLQDV TEDQLSLASI HYMRSHYQEA IDIYKRILLD 
       190        200        210        220        230        240 
NREYLALNVY VALCYYKLDY YDVSQEVLAV YLQQIPDSTI ALNLKACNHF RLYNGRAAEA 
       250        260        270        280        290        300 
ELKSLMDNAS SSFEFAKELI RHNLVVFRGG EGALQVLPPL VDVIPEARLN LVIYYLRQDD 
       310        320        330        340        350        360 
VQEAYNLIKD LEPTTPQEYI LKGVVNAALG QEMGSRDHMK IAQQFFQLVG GSASECDTIP 
       370        380        390        400        410        420 
GRQCMASCFF LLKQFDDVLI YLNSFKSYFY NDDIFNFNYA QAKAATGNTS EGEEAFLLIQ 
       430        440        450        460        470        480 
SEKMKNDYIY LSWLARCYIM NKKPRLAWEL YLKMETSGES FSLLQLIAND CYKMGQFYYS 
       490        500        510        520        530        540 
AKAFDVLERL DPNPEYWEGK RGACVGIFQM IIAGREPKET LREVLHLLRS TGNTQVEYMI 
       550    
RIMKKWAKEN RVSI         10         20         30         40         50         60 
MMLSRAKPAV GRGVQHTDKR KKKGRKIPKL EELLSKRDFT GAITLLEFKR HVGEEEEDTN 
        70         80         90        100        110        120 
LWIGYCAFHL GDYKRALEEY ENATKEENCN SEVWVNLACT YFFLGMYKQA EAAGFKASKS 
       130        140        150        160        170        180 
RLQNRLLFHL AHKFNDEKKL MSFHQNLQDV TEDQLSLASI HYMRSHYQEA IDIYKRILLD 
       190        200        210        220        230        240 
NREYLALNVY VALCYYKLDY YDVSQEVLAV YLQQIPDSTI ALNLKACNHF RLYNGRAAEA 
       250        260        270        280        290        300 
ELKSLMDNAS SSFEFAKELI RHNLVVFRGG EGALQVLPPL VDVIPEARLN LVIYYLRQDD 
       310        320        330        340        350        360 
VQEAYNLIKD LEPTTPQEYI LKGVVNAALG QEMGSRDHMK IAQQFFQLVG GSASECDTIP 
       370        380        390        400        410        420 
GRQCMASCFF LLKQFDDVLI YLNSFKSYFY NDDIFNFNYA QAKAATGNTS EGEEAFLLIQ 
       430        440        450        460        470        480 
SEKMKNDYIY LSWLARCYIM NKKPRLAWEL YLKMETSGES FSLLQLIAND CYKMGQFYYS 
       490        500        510        520        530        540 
AKAFDVLERL DPNPEYWEGK RGACVGIFQM IIAGREPKET LREVLHLLRS TGNTQVEYMI 
       550    
RIMKKWAKEN RVSI         10         20         30         40         50         60 
MMLSRAKPAV GRGVQHTDKR KKKGRKIPKL EELLSKRDFT GAITLLEFKR HVGEEEEDTN 
        70         80         90        100        110        120 
LWIGYCAFHL GDYKRALEEY ENATKEENCN SEVWVNLACT YFFLGMYKQA EAAGFKASKS 
       130        140        150        160        170        180 
RLQNRLLFHL AHKFNDEKKL MSFHQNLQDV TEDQLSLASI HYMRSHYQEA IDIYKRILLD 
       190        200        210        220        230        240 
NREYLALNVY VALCYYKLDY YDVSQEVLAV YLQQIPDSTI ALNLKACNHF RLYNGRAAEA 
       250        260        270        280        290        300 
ELKSLMDNAS SSFEFAKELI RHNLVVFRGG EGALQVLPPL VDVIPEARLN LVIYYLRQDD 
       310        320        330        340        350        360 
VQEAYNLIKD LEPTTPQEYI LKGVVNAALG QEMGSRDHMK IAQQFFQLVG GSASECDTIP 
       370        380        390        400        410        420 
GRQCMASCFF LLKQFDDVLI YLNSFKSYFY NDDIFNFNYA QAKAATGNTS EGEEAFLLIQ 
       430        440        450        460        470        480 
SEKMKNDYIY LSWLARCYIM NKKPRLAWEL YLKMETSGES FSLLQLIAND CYKMGQFYYS 
       490        500        510        520        530        540 
AKAFDVLERL DPNPEYWEGK RGACVGIFQM IIAGREPKET LREVLHLLRS TGNTQVEYMI 
       550    
RIMKKWAKEN RVSI



Filter Information:


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Evidence Codes:


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Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    A0AVF1-1-unknown MMLSRA... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    A0AVF1-1-unknown MMLSRA... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt93357
    A0AVF1-1-unknown MMLSRA... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt93358

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...NRVSI 554 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...NRVSI 554 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt88976

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)