TopFIND 4.0

A8MQA3: Pentatricopeptide repeat-containing protein At4g21065

General Information

Protein names
- Pentatricopeptide repeat-containing protein At4g21065
Gene names PCMP-H28
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID A8MQA3

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSPFSETSVL LLPMVEKCIN LLQTYGVSSI TKLRQIHAFS IRHGVSISDA ELGKHLIFYL 
        70         80         90        100        110        120 
VSLPSPPPMS YAHKVFSKIE KPINVFIWNT LIRGYAEIGN SISAFSLYRE MRVSGLVEPD 
       130        140        150        160        170        180 
THTYPFLIKA VTTMADVRLG ETIHSVVIRS GFGSLIYVQN SLLHLYANCG DVASAYKVFD 
       190        200        210        220        230        240 
KMPEKDLVAW NSVINGFAEN GKPEEALALY TEMNSKGIKP DGFTIVSLLS ACAKIGALTL 
       250        260        270        280        290        300 
GKRVHVYMIK VGLTRNLHSS NVLLDLYARC GRVEEAKTLF DEMVDKNSVS WTSLIVGLAV 
       310        320        330        340        350        360 
NGFGKEAIEL FKYMESTEGL LPCEITFVGI LYACSHCGMV KEGFEYFRRM REEYKIEPRI 
       370        380        390        400        410        420 
EHFGCMVDLL ARAGQVKKAY EYIKSMPMQP NVVIWRTLLG ACTVHGDSDL AEFARIQILQ 
       430        440        450        460        470        480 
LEPNHSGDYV LLSNMYASEQ RWSDVQKIRK QMLRDGVKKV PGHSLVEVGN RVHEFLMGDK 
       490        500        510        520        530        540 
SHPQSDAIYA KLKEMTGRLR SEGYVPQISN VYVDVEEEEK ENAVVYHSEK IAIAFMLIST 
       550        560        570        580        590    
PERSPITVVK NLRVCADCHL AIKLVSKVYN REIVVRDRSR FHHFKNGSCS CQDYW

Isoforms

- Isoform 2 of Pentatricopeptide repeat-containing protein At4g21065

Sequence View

        10         20         30         40         50         60 
MSPFSETSVL LLPMVEKCIN LLQTYGVSSI TKLRQIHAFS IRHGVSISDA ELGKHLIFYL 
        70         80         90        100        110        120 
VSLPSPPPMS YAHKVFSKIE KPINVFIWNT LIRGYAEIGN SISAFSLYRE MRVSGLVEPD 
       130        140        150        160        170        180 
THTYPFLIKA VTTMADVRLG ETIHSVVIRS GFGSLIYVQN SLLHLYANCG DVASAYKVFD 
       190        200        210        220        230        240 
KMPEKDLVAW NSVINGFAEN GKPEEALALY TEMNSKGIKP DGFTIVSLLS ACAKIGALTL 
       250        260        270        280        290        300 
GKRVHVYMIK VGLTRNLHSS NVLLDLYARC GRVEEAKTLF DEMVDKNSVS WTSLIVGLAV 
       310        320        330        340        350        360 
NGFGKEAIEL FKYMESTEGL LPCEITFVGI LYACSHCGMV KEGFEYFRRM REEYKIEPRI 
       370        380        390        400        410        420 
EHFGCMVDLL ARAGQVKKAY EYIKSMPMQP NVVIWRTLLG ACTVHGDSDL AEFARIQILQ 
       430        440        450        460        470        480 
LEPNHSGDYV LLSNMYASEQ RWSDVQKIRK QMLRDGVKKV PGHSLVEVGN RVHEFLMGDK 
       490        500        510        520        530        540 
SHPQSDAIYA KLKEMTGRLR SEGYVPQISN VYVDVEEEEK ENAVVYHSEK IAIAFMLIST 
       550        560        570        580        590    
PERSPITVVK NLRVCADCHL AIKLVSKVYN REIVVRDRSR FHHFKNGSCS CQDYW



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    A8MQA3-1-unknown MSPFSE... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    A8MQA3-134-unknown MADVRL... 134 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt85865

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...CQDYW 595 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...CQDYW 595 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt81483

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)