TopFIND 4.0

F4J4Y5: Probable mediator of RNA polymerase II transcription subunit 26a

General Information

Protein names
- Probable mediator of RNA polymerase II transcription subunit 26a
Gene names MED26A
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID F4J4Y5

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MAKMRPSVSL DTWREYFRRG DSDIFGIIDH AIMVAAADWP KEFKSRSDRI AELLFSCKVS 
        70         80         90        100        110        120 
RCIGCDHLEL SIAGDEAAVE IVGVGGGGDR GDSGVATGEG EEASVSVDEV MRIRDILSNK 
       130        140        150        160        170        180 
DDEKDSVLLE SLRKLESMSM SVDILKDTEI GKAVNGLRRH SSDKISKLAK TLFAEWKRLV 
       190        200        210        220        230        240 
DQWMNTPEEM AGTEGTPESL NLSVIDEEEA FPSPPHDLDI YAPEPNGFEL SQILDCLDCD 
       250        260        270        280        290        300 
GNPRHSVESK HERKSQSSAG RRPKGTNDAN VVGRYCNDQQ TRREEADVRP MKHSATDVVE 
       310        320        330        340        350        360 
PKRQTKQSRE QMVSAIQRKP TAVTEQKRKL AGPQQDKLKA LDPDSKFEFA KRKLQESYHQ 
       370        380        390        400        410        420 
HENAKRQRTI QVLETIPKQN KVQKPQLKRP ATRRYIYWYF WSSEFPGYEL PSLILNLANP 
       430        440        450        460        470        480 
RDSSSQFSRH DELMIDIPVY FGLVLVQIDK AEMVDEMMIF KKMSVLLTEK DFVDAIVSVS 
       490        500        510        520        530        540 
LKDLTRSLFV RFEAKACPKF DLIHKTSVET VRCVGKTFMH MLSKVSREFP PRNRTHPGGL 
       550        560        570        580    
LYQRFDPTHL SLARQQVAIC KETDSQYPHE IVIHWTSASA 

Isoforms

- Isoform 2 of Probable mediator of RNA polymerase II transcription subunit 26a

Sequence View

        10         20         30         40         50         60 
MAKMRPSVSL DTWREYFRRG DSDIFGIIDH AIMVAAADWP KEFKSRSDRI AELLFSCKVS 
        70         80         90        100        110        120 
RCIGCDHLEL SIAGDEAAVE IVGVGGGGDR GDSGVATGEG EEASVSVDEV MRIRDILSNK 
       130        140        150        160        170        180 
DDEKDSVLLE SLRKLESMSM SVDILKDTEI GKAVNGLRRH SSDKISKLAK TLFAEWKRLV 
       190        200        210        220        230        240 
DQWMNTPEEM AGTEGTPESL NLSVIDEEEA FPSPPHDLDI YAPEPNGFEL SQILDCLDCD 
       250        260        270        280        290        300 
GNPRHSVESK HERKSQSSAG RRPKGTNDAN VVGRYCNDQQ TRREEADVRP MKHSATDVVE 
       310        320        330        340        350        360 
PKRQTKQSRE QMVSAIQRKP TAVTEQKRKL AGPQQDKLKA LDPDSKFEFA KRKLQESYHQ 
       370        380        390        400        410        420 
HENAKRQRTI QVLETIPKQN KVQKPQLKRP ATRRYIYWYF WSSEFPGYEL PSLILNLANP 
       430        440        450        460        470        480 
RDSSSQFSRH DELMIDIPVY FGLVLVQIDK AEMVDEMMIF KKMSVLLTEK DFVDAIVSVS 
       490        500        510        520        530        540 
LKDLTRSLFV RFEAKACPKF DLIHKTSVET VRCVGKTFMH MLSKVSREFP PRNRTHPGGL 
       550        560        570        580    
LYQRFDPTHL SLARQQVAIC KETDSQYPHE IVIHWTSASA 



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    F4J4Y5-1-unknown MAKMRP... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    F4J4Y5-1-unknown MAKMRP... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt80696

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...TSASA 580 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)