TopFIND 4.0

O04492: Double-stranded RNA-binding protein 1

General Information

Protein names
- Double-stranded RNA-binding protein 1
- Protein HYPONASTIC LEAVES 1
- dsRNA-binding protein 1
- AtDRB1
Gene names DRB1
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID O04492

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MTSTDVSSGV SNCYVFKSRL QEYAQKYKLP TPVYEIVKEG PSHKSLFQST VILDGVRYNS 
        70         80         90        100        110        120 
LPGFFNRKAA EQSAAEVALR ELAKSSELSQ CVSQPVHETG LCKNLLQEYA QKMNYAIPLY 
       130        140        150        160        170        180 
QCQKVETLGR VTQFTCTVEI GGIKYTGAAT RTKKDAEISA GRTALLAIQS DTKNNLANYN 
       190        200        210        220        230        240 
TQLTVLPCEK KTIQAAIPLK ETVKTLKARK AQFKKKAQKG KRTVAKNPED IIIPPQPTDH 
       250        260        270        280        290        300 
CQNDQSEKIE TTPNLEPSSC MNGLKEAAFG SVETEKIETT PNLEPPSCMN GLKEAAFGSV 
       310        320        330        340        350        360 
ETEKIETTPN LEPPSCMNGL KEAAFGSVET EKIETTPNLE PSSCMNGLKE AAFGSVETEK 
       370        380        390        400        410    
IETTPNLEPP SCMNGLKEAA FGSVETEKIE TTPNLESSSC MSGLKEAAFG SVETEASHA

Isoforms

- Isoform 2 of Double-stranded RNA-binding protein 1

Sequence View

        10         20         30         40         50         60 
MTSTDVSSGV SNCYVFKSRL QEYAQKYKLP TPVYEIVKEG PSHKSLFQST VILDGVRYNS 
        70         80         90        100        110        120 
LPGFFNRKAA EQSAAEVALR ELAKSSELSQ CVSQPVHETG LCKNLLQEYA QKMNYAIPLY 
       130        140        150        160        170        180 
QCQKVETLGR VTQFTCTVEI GGIKYTGAAT RTKKDAEISA GRTALLAIQS DTKNNLANYN 
       190        200        210        220        230        240 
TQLTVLPCEK KTIQAAIPLK ETVKTLKARK AQFKKKAQKG KRTVAKNPED IIIPPQPTDH 
       250        260        270        280        290        300 
CQNDQSEKIE TTPNLEPSSC MNGLKEAAFG SVETEKIETT PNLEPPSCMN GLKEAAFGSV 
       310        320        330        340        350        360 
ETEKIETTPN LEPPSCMNGL KEAAFGSVET EKIETTPNLE PSSCMNGLKE AAFGSVETEK 
       370        380        390        400        410    
IETTPNLEPP SCMNGLKEAA FGSVETEKIE TTPNLESSSC MSGLKEAAFG SVETEASHA



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    O04492-1-unknown MTSTDV... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    O04492-1-unknown MTSTDV... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt73234

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...EASHA 419 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...EASHA 419 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt68852

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)