TopFIND 4.0

O23212: Splicing factor U2af large subunit A {ECO:0000303|PubMed:24580679}

General Information

Protein names
- Splicing factor U2af large subunit A {ECO:0000303|PubMed:24580679}
- U2 auxiliary factor 65 kDa subunit A {ECO:0000303|PubMed:24580679}
- U2 small nuclear ribonucleoprotein auxiliary factor large subunit A {ECO:0000303|PubMed:24580679}
- U2 snRNP auxiliary factor large subunit A {ECO:0000303|PubMed:24580679}
Gene names U2AF65A
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID O23212

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSEFEDHEGN GTVADAIYDE ENGGRDGEIE DQLDSKPKRE SRDHERETSR SKDREREKGR 
        70         80         90        100        110        120 
DKDRERDSEV SRRSRDRDGE KSKERSRDKD RDHRERHHRS SRHRDHSRER GERRERGGRD 
       130        140        150        160        170        180 
DDDYRRSRDR DHDRRRDDRG GRRSRRSRSR SKDRSERRTR SRSPSKSKQR VSGFDMAPPA 
       190        200        210        220        230        240 
SAMLAAGAAV TGQVPPAPPT LPGAGMFPNM FPLPTGQSFG GLSMMPIQAM TQQATRHARR 
       250        260        270        280        290        300 
VYVGGLSPTA NEQSVATFFS QVMAAVGGNT AGPGDAVVNV YINHEKKFAF VEMRSVEEAS 
       310        320        330        340        350        360 
NAMSLDGIIF EGAPVKVRRP SDYNPSLAAT LGPSQPSPHL NLAAVGLTPG ASGGLEGPDR 
       370        380        390        400        410        420 
IFVGGLPYYF TESQVRELLE SFGGLKGFDL VKDRETGNSK GYAFCVYQDL SVTDIACAAL 
       430        440        450        460        470        480 
NGIKMGDKTL TVRRANQGTM LQKPEQENVL LHAQQQIAFQ RVMLQPGAVA TTVVCLTQVV 
       490        500        510        520        530        540 
TEDELRDDEE YGDIMEDMRQ EGGKFGALTN VVIPRPSPNG EPVAGLGKVF LKYADTDGST 
       550        560        570    
RARFGMNGRK FGGNEVVAVY YPEDKFEQGD YGA

Isoforms

- Isoform 2 of Splicing factor U2af large subunit A - Isoform 3 of Splicing factor U2af large subunit A

Sequence View

        10         20         30         40         50         60 
MSEFEDHEGN GTVADAIYDE ENGGRDGEIE DQLDSKPKRE SRDHERETSR SKDREREKGR 
        70         80         90        100        110        120 
DKDRERDSEV SRRSRDRDGE KSKERSRDKD RDHRERHHRS SRHRDHSRER GERRERGGRD 
       130        140        150        160        170        180 
DDDYRRSRDR DHDRRRDDRG GRRSRRSRSR SKDRSERRTR SRSPSKSKQR VSGFDMAPPA 
       190        200        210        220        230        240 
SAMLAAGAAV TGQVPPAPPT LPGAGMFPNM FPLPTGQSFG GLSMMPIQAM TQQATRHARR 
       250        260        270        280        290        300 
VYVGGLSPTA NEQSVATFFS QVMAAVGGNT AGPGDAVVNV YINHEKKFAF VEMRSVEEAS 
       310        320        330        340        350        360 
NAMSLDGIIF EGAPVKVRRP SDYNPSLAAT LGPSQPSPHL NLAAVGLTPG ASGGLEGPDR 
       370        380        390        400        410        420 
IFVGGLPYYF TESQVRELLE SFGGLKGFDL VKDRETGNSK GYAFCVYQDL SVTDIACAAL 
       430        440        450        460        470        480 
NGIKMGDKTL TVRRANQGTM LQKPEQENVL LHAQQQIAFQ RVMLQPGAVA TTVVCLTQVV 
       490        500        510        520        530        540 
TEDELRDDEE YGDIMEDMRQ EGGKFGALTN VVIPRPSPNG EPVAGLGKVF LKYADTDGST 
       550        560        570    
RARFGMNGRK FGGNEVVAVY YPEDKFEQGD YGA         10         20         30         40         50         60 
MSEFEDHEGN GTVADAIYDE ENGGRDGEIE DQLDSKPKRE SRDHERETSR SKDREREKGR 
        70         80         90        100        110        120 
DKDRERDSEV SRRSRDRDGE KSKERSRDKD RDHRERHHRS SRHRDHSRER GERRERGGRD 
       130        140        150        160        170        180 
DDDYRRSRDR DHDRRRDDRG GRRSRRSRSR SKDRSERRTR SRSPSKSKQR VSGFDMAPPA 
       190        200        210        220        230        240 
SAMLAAGAAV TGQVPPAPPT LPGAGMFPNM FPLPTGQSFG GLSMMPIQAM TQQATRHARR 
       250        260        270        280        290        300 
VYVGGLSPTA NEQSVATFFS QVMAAVGGNT AGPGDAVVNV YINHEKKFAF VEMRSVEEAS 
       310        320        330        340        350        360 
NAMSLDGIIF EGAPVKVRRP SDYNPSLAAT LGPSQPSPHL NLAAVGLTPG ASGGLEGPDR 
       370        380        390        400        410        420 
IFVGGLPYYF TESQVRELLE SFGGLKGFDL VKDRETGNSK GYAFCVYQDL SVTDIACAAL 
       430        440        450        460        470        480 
NGIKMGDKTL TVRRANQGTM LQKPEQENVL LHAQQQIAFQ RVMLQPGAVA TTVVCLTQVV 
       490        500        510        520        530        540 
TEDELRDDEE YGDIMEDMRQ EGGKFGALTN VVIPRPSPNG EPVAGLGKVF LKYADTDGST 
       550        560        570    
RARFGMNGRK FGGNEVVAVY YPEDKFEQGD YGA



Filter Information:


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Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


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Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    O23212-1-unknown MSEFED... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    O23212-1-unknown MSEFED... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt93511
    O23212-1-unknown MSEFED... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt93512

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...GDYGA 573 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)