TopFIND 4.0

O24629: RNA polymerase sigma factor sigA

General Information

Protein names
- RNA polymerase sigma factor sigA
- Sigma factor A
- Sigma-A
- RNA polymerase sigma factor sig1
- Atsig1
- Sigma factor 1
- RNA polymerase sigma factor sig2
- Atsig2
- Sigma factor 2
- RNA polymerase sigma factor sigB
- Sigma factor B
- Sigma-B
Gene names SIGA
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID O24629

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MATAAVIGLN TGKRLLSSSF YHSDVTEKFL SVNDHCSSQY HIASTKSGIT AKKASNYSPS 
        70         80         90        100        110        120 
FPSSNRHTQS AKALKESVDV ASTEKPWLPN GTDKELEEEC YDDDDLISHS VEAILLLQKS 
       130        140        150        160        170        180 
MLEKSWNLSF EKAVSSEYPG KGTIRKKKIP VITCSGISAR QRRIGAKKKT NMTHVKAVSD 
       190        200        210        220        230        240 
VSSGKQVRGY VKGVISEDVL SHVEVVRLSK KIKSGLRLDD HKSRLKDRLG CEPSDEQLAV 
       250        260        270        280        290        300 
SLKISRAELQ AWLMECHLAR EKLAMSNVRL VMSIAQRYDN LGAEMSDLVQ GGLIGLLRGI 
       310        320        330        340        350        360 
EKFDSSKGFR ISTYVYWWIR QGVSRALVDN SRTLRLPTHL HERLGLIRNA KLRLQEKGIT 
       370        380        390        400        410        420 
PSIDRIAESL NMSQKKVRNA TEAVSKVFSL DRDAFPSLNG LPGETHHSYI ADTRLENNPW 
       430        440        450        460        470        480 
HGYDDLALKE EVSKLISATL GEREKEIIRL YYGLDKECLT WEDISKRIGL SRERVRQVGL 
       490        500    
VALEKLKHAA RKRKMEAMIL KN

Isoforms

- Isoform 2 of RNA polymerase sigma factor sigA

Sequence View

        10         20         30         40         50         60 
MATAAVIGLN TGKRLLSSSF YHSDVTEKFL SVNDHCSSQY HIASTKSGIT AKKASNYSPS 
        70         80         90        100        110        120 
FPSSNRHTQS AKALKESVDV ASTEKPWLPN GTDKELEEEC YDDDDLISHS VEAILLLQKS 
       130        140        150        160        170        180 
MLEKSWNLSF EKAVSSEYPG KGTIRKKKIP VITCSGISAR QRRIGAKKKT NMTHVKAVSD 
       190        200        210        220        230        240 
VSSGKQVRGY VKGVISEDVL SHVEVVRLSK KIKSGLRLDD HKSRLKDRLG CEPSDEQLAV 
       250        260        270        280        290        300 
SLKISRAELQ AWLMECHLAR EKLAMSNVRL VMSIAQRYDN LGAEMSDLVQ GGLIGLLRGI 
       310        320        330        340        350        360 
EKFDSSKGFR ISTYVYWWIR QGVSRALVDN SRTLRLPTHL HERLGLIRNA KLRLQEKGIT 
       370        380        390        400        410        420 
PSIDRIAESL NMSQKKVRNA TEAVSKVFSL DRDAFPSLNG LPGETHHSYI ADTRLENNPW 
       430        440        450        460        470        480 
HGYDDLALKE EVSKLISATL GEREKEIIRL YYGLDKECLT WEDISKRIGL SRERVRQVGL 
       490        500    
VALEKLKHAA RKRKMEAMIL KN



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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    O24629-1-unknown MATAAV... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt89742
    O24629-24-unknown DVTEKF... 24 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    O24629-24-unknown DVTEKF... 24 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt113663

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...MILKN 502 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)