TopFIND 4.0

O49595: High mobility group B protein 1

General Information

Protein names
- High mobility group B protein 1
- High mobility group protein A
- AtHMGalpha
- HMG alpha
- Nucleosome/chromatin assembly factor group D 01
- Nucleosome/chromatin assembly factor group D 1
Gene names HMGB1
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID O49595

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MKTAKGKDKV KTTKEALKPV DDRKVGKRKA PAEKPTKRET RKEKKAKKDP NKPKRAPSAF 
        70         80         90        100        110        120 
FVFLEDFRVT FKKENPNVKA VSAVGKAGGQ KWKSMSQAEK APYEEKAAKR KAEYEKQMDA 
       130        140        150        160        170    
YNKNLEEGSD ESEKSRSEIN DEDEASGEEE LLEKEAAGDD EEEEEEEDDD DDDDEEED

Isoforms

- Isoform 2 of High mobility group B protein 1

Sequence View

        10         20         30         40         50         60 
MKTAKGKDKV KTTKEALKPV DDRKVGKRKA PAEKPTKRET RKEKKAKKDP NKPKRAPSAF 
        70         80         90        100        110        120 
FVFLEDFRVT FKKENPNVKA VSAVGKAGGQ KWKSMSQAEK APYEEKAAKR KAEYEKQMDA 
       130        140        150        160        170    
YNKNLEEGSD ESEKSRSEIN DEDEASGEEE LLEKEAAGDD EEEEEEEDDD DDDDEEED



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Directness:


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Evidence Codes:


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Protease Assignment Confidence:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    O49595-1-unknown MKTAKG... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    O49595-1-unknown MKTAKG... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt77085

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...DEEED 178 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...DEEED 178 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt72703

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)