TopFIND 4.0

O80567: La-related protein 6B

General Information

Protein names
- La-related protein 6B
- AtLARP6b
- VirF-interacting protein FIP1
Gene names LARP6B
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID O80567

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MADQQTLDSS TPPPTQSDDL SHSHSTSSTT SASSSSDPSL LRSLSLSRLN AGAPEFVPGR 
        70         80         90        100        110        120 
TTPPLPQPPR MIIPPPPPHG MLHMYHHQPP FNTPVLGPVP IQPHLVPVQN HHPHHRFHQH 
       130        140        150        160        170        180 
HHHNRHQNQQ YVPVRNHGEY QQRGGVGGEQ EPDLVSKKND RRDHSKRESK NDQVTETGAS 
       190        200        210        220        230        240 
VSIDSKTGLP EDSIQKIVNQ VEYYFSDLNL ATTDHLMRFI CKDPEGYVPI HVVASFKKIK 
       250        260        270        280        290        300 
AVINNNSQLA AVLQNSAKLF VSEDGKKVRR ISPITESAIE ELQSRIIVAE NLPEDHCYQN 
       310        320        330        340        350        360 
LMKIFSTVGS VKNIRTCQPQ NNGSGAPPAA RSAAKSDGTL FSNKVHAFVE YEIVELAERA 
       370        380        390        400        410        420 
VTELSEAGNW RSGLKVRLML KHQTKEPKQG QGRGRKGHDA DVEHEEDDAT TSEQQPIEKQ 
       430        440        450        460        470        480 
SDDCSGEWDT HMQEQPIGED QGNEKAAGQR KGRNRGRGKG RGRGQPHQNQ NQNNNHSHNQ 
       490        500        510        520        530        540 
NHNHNGRGNH HHHHHHQVGT QPSNNPMNNM EQPGMGKQQP PGPRMPDGTR GFSMGRGKPV 
   
MVQAE

Isoforms

- Isoform 2 of La-related protein 6B - Isoform 3 of La-related protein 6B

Sequence View

        10         20         30         40         50         60 
MADQQTLDSS TPPPTQSDDL SHSHSTSSTT SASSSSDPSL LRSLSLSRLN AGAPEFVPGR 
        70         80         90        100        110        120 
TTPPLPQPPR MIIPPPPPHG MLHMYHHQPP FNTPVLGPVP IQPHLVPVQN HHPHHRFHQH 
       130        140        150        160        170        180 
HHHNRHQNQQ YVPVRNHGEY QQRGGVGGEQ EPDLVSKKND RRDHSKRESK NDQVTETGAS 
       190        200        210        220        230        240 
VSIDSKTGLP EDSIQKIVNQ VEYYFSDLNL ATTDHLMRFI CKDPEGYVPI HVVASFKKIK 
       250        260        270        280        290        300 
AVINNNSQLA AVLQNSAKLF VSEDGKKVRR ISPITESAIE ELQSRIIVAE NLPEDHCYQN 
       310        320        330        340        350        360 
LMKIFSTVGS VKNIRTCQPQ NNGSGAPPAA RSAAKSDGTL FSNKVHAFVE YEIVELAERA 
       370        380        390        400        410        420 
VTELSEAGNW RSGLKVRLML KHQTKEPKQG QGRGRKGHDA DVEHEEDDAT TSEQQPIEKQ 
       430        440        450        460        470        480 
SDDCSGEWDT HMQEQPIGED QGNEKAAGQR KGRNRGRGKG RGRGQPHQNQ NQNNNHSHNQ 
       490        500        510        520        530        540 
NHNHNGRGNH HHHHHHQVGT QPSNNPMNNM EQPGMGKQQP PGPRMPDGTR GFSMGRGKPV 
   
MVQAE         10         20         30         40         50         60 
MADQQTLDSS TPPPTQSDDL SHSHSTSSTT SASSSSDPSL LRSLSLSRLN AGAPEFVPGR 
        70         80         90        100        110        120 
TTPPLPQPPR MIIPPPPPHG MLHMYHHQPP FNTPVLGPVP IQPHLVPVQN HHPHHRFHQH 
       130        140        150        160        170        180 
HHHNRHQNQQ YVPVRNHGEY QQRGGVGGEQ EPDLVSKKND RRDHSKRESK NDQVTETGAS 
       190        200        210        220        230        240 
VSIDSKTGLP EDSIQKIVNQ VEYYFSDLNL ATTDHLMRFI CKDPEGYVPI HVVASFKKIK 
       250        260        270        280        290        300 
AVINNNSQLA AVLQNSAKLF VSEDGKKVRR ISPITESAIE ELQSRIIVAE NLPEDHCYQN 
       310        320        330        340        350        360 
LMKIFSTVGS VKNIRTCQPQ NNGSGAPPAA RSAAKSDGTL FSNKVHAFVE YEIVELAERA 
       370        380        390        400        410        420 
VTELSEAGNW RSGLKVRLML KHQTKEPKQG QGRGRKGHDA DVEHEEDDAT TSEQQPIEKQ 
       430        440        450        460        470        480 
SDDCSGEWDT HMQEQPIGED QGNEKAAGQR KGRNRGRGKG RGRGQPHQNQ NQNNNHSHNQ 
       490        500        510        520        530        540 
NHNHNGRGNH HHHHHHQVGT QPSNNPMNNM EQPGMGKQQP PGPRMPDGTR GFSMGRGKPV 
   
MVQAE



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Evidence Codes:


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Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    O80567-1-unknown MADQQT... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    O80567-1-unknown MADQQT... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt79963

C-termini

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)