TopFIND 4.0

O80653: SNW/SKI-interacting protein

General Information

Protein names
- SNW/SKI-interacting protein
- AtSKIP
- Protein EARLY FLOWERING AND INSENSITIVE TO PHOTOPERIOD 1
- SNW domain-containing protein
Gene names SKIP
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID O80653

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MKSLNDLPAP KSTTTTYYDH SNDAWFKNRV TESETVKSSS IKFKVVPAYL NRQGLRPKNP 
        70         80         90        100        110        120 
EDFGDGGAFP EIHLPQYPLL MGKNKSNKPG AKTLPVTVDA QGNVVFDAIV RQNENSRKIV 
       130        140        150        160        170        180 
YSQHKDIIPK FLKNEGDLGT VVDEEEELQK EIQETAEETK AAIEKIVNVR LSAAQPSNIA 
       190        200        210        220        230        240 
RQSGDSQYIK YKPSQQSSAF NSGAKERIIR MVEMPVDPLD PPKFKHKRVP RASGSPPVPV 
       250        260        270        280        290        300 
MHSPPRPVTV KDQQDWKIPP CISNWKNPKG YTIPLDKRLA ADGRGLQDVQ INDNFAKLSE 
       310        320        330        340        350        360 
ALYVAEQKAR EAVSMRSKVQ KEMVMKDKER KEQELRALAQ KARSERTGAA MSMPVSSDRG 
       370        380        390        400        410        420 
RSESVDPRGD YDNYDQDRGR EREREEPQET REEREKRIQR EKIREERRRE RERERRLDAK 
       430        440        450        460        470        480 
DAAMGKKSKI TRDRDRDISE KVALGMASTG GKGGGEVMYD QRLFNQDKGM DSGFAADDQY 
       490        500        510        520        530        540 
NLYDKGLFTA QPTLSTLYKP KKDNDEEMYG NADEQLDKIK NTERFKPDKA FTGASERVGS 
       550        560        570        580        590        600 
KRDRPVEFEK EEEQDPFGLE KWVSDLKKGK KPLDKIGSGG TMRASGGGGS SSRDDDHGGS 
       610    
GRTKINFERS DRR

Isoforms

- Isoform 2 of SNW/SKI-interacting protein

Sequence View

        10         20         30         40         50         60 
MKSLNDLPAP KSTTTTYYDH SNDAWFKNRV TESETVKSSS IKFKVVPAYL NRQGLRPKNP 
        70         80         90        100        110        120 
EDFGDGGAFP EIHLPQYPLL MGKNKSNKPG AKTLPVTVDA QGNVVFDAIV RQNENSRKIV 
       130        140        150        160        170        180 
YSQHKDIIPK FLKNEGDLGT VVDEEEELQK EIQETAEETK AAIEKIVNVR LSAAQPSNIA 
       190        200        210        220        230        240 
RQSGDSQYIK YKPSQQSSAF NSGAKERIIR MVEMPVDPLD PPKFKHKRVP RASGSPPVPV 
       250        260        270        280        290        300 
MHSPPRPVTV KDQQDWKIPP CISNWKNPKG YTIPLDKRLA ADGRGLQDVQ INDNFAKLSE 
       310        320        330        340        350        360 
ALYVAEQKAR EAVSMRSKVQ KEMVMKDKER KEQELRALAQ KARSERTGAA MSMPVSSDRG 
       370        380        390        400        410        420 
RSESVDPRGD YDNYDQDRGR EREREEPQET REEREKRIQR EKIREERRRE RERERRLDAK 
       430        440        450        460        470        480 
DAAMGKKSKI TRDRDRDISE KVALGMASTG GKGGGEVMYD QRLFNQDKGM DSGFAADDQY 
       490        500        510        520        530        540 
NLYDKGLFTA QPTLSTLYKP KKDNDEEMYG NADEQLDKIK NTERFKPDKA FTGASERVGS 
       550        560        570        580        590        600 
KRDRPVEFEK EEEQDPFGLE KWVSDLKKGK KPLDKIGSGG TMRASGGGGS SSRDDDHGGS 
       610    
GRTKINFERS DRR



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


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Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    O80653-1-unknown MKSLND... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    O80653-1-unknown MKSLND... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt89837

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...RSDRR 613 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...RSDRR 613 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt85455

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)