TopFIND 4.0

P05539: Collagen alpha-1(II) chain {ECO:0000250|UniProtKB:P02458}

General Information

Protein names
- Collagen alpha-1(II) chain {ECO:0000250|UniProtKB:P02458}
- Alpha-1 type II collagen {ECO:0000250|UniProtKB:P02458}
- Collagen alpha-1(II) chain {ECO:0000250|UniProtKB:P02458}
- Chondrocalcin {ECO:0000250|UniProtKB:P02458}
Gene names Col2a1
Organism Rattus norvegicus
Protease Family
Protease ID
Chromosome location
UniProt ID P05539

2

N-termini

2

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MIRLGAPQSL VLLTLLIATV LQCQGQDARK LGPKGQKGEP GDIKDIIGPK GPPGPQGPAG 
        70         80         90        100        110        120 
EQGPRGDRGD KGERGAPGPR GRDGEPGTPG NPGPPGPPGP PGPPGLGGGN FAAQMAGGFD 
       130        140        150        160        170        180 
EKAGGAQMGV MQGPMGPMGP RGPPGPAGAP GPQGFQGNPG EPGEPGVSGP IGPRGPPGPA 
       190        200        210        220        230        240 
GKPGDDGEAG KPGKAGERGL PGPQGARGFP GTPGLPGVKG HRGYPGLDGA KGEAGAPGVK 
       250        260        270        280        290        300 
GESGSPGENG SPGPMGPRGL PGERGRTGPA GAAGARGNDG QPGPAGPPGP VGPAGGPGFL 
       310        320        330        340        350        360 
GAPGAKGEAG PTGARGPEGA QGSRGEPGNP GSPGPAGASG NPGTDGIPGA KGSAGAPGIA 
       370        380        390        400        410        420 
GAPGFPGPRG PPGPQGATGP LGPKGQTGEP GIAGFKGEQG PKGETGPAGP QGAPGPAGEE 
       430        440        450        460        470        480 
GKRGARGEPG GAGPIGPPGE RGAPGNRGFP GQDGLAGPKG APGERGPSGL AGPKGANGDP 
       490        500        510        520        530        540 
GRPGEPGLPG ARGLTGRPGD AGPQGKVGPS GAPGEDGRPG PPGPQGARGQ PGVMGFPGPK 
       550        560        570        580        590        600 
GANGEPGKAG EKGLAGAPGL RGLPGKDGET GAAGPPGPSG PAGERGEQGA PGPSGFQGLP 
       610        620        630        640        650        660 
GPPGPPGEGG KQGDQGIPGE AGAPGLVGPR GERGFPGERG SPGAQGLQGP RGLPGTPGTD 
       670        680        690        700        710        720 
GPKGAAGPDG PPGAQGPPGL QGMPGERGAA GIAGPKGDRG DVGEKGPEGA PGKDGGRGLT 
       730        740        750        760        770        780 
GPIGPPGPAG ANGEKGEVGP PGPSGSTGAR GAPGERGETG PPGPAGFAGP PGADGQPGAK 
       790        800        810        820        830        840 
GDQGEAGQKG DAGAPGPQGP SGAPGPQGPT GVTGPKGARG AQGPPGATGF PGAAGRVGPP 
       850        860        870        880        890        900 
GSNGNPGPAG PPGPAGKDGP KGARGDTGAP GRAGDPGLQG PAGAPGEKGE PGDDGPSGSD 
       910        920        930        940        950        960 
GPPGPQGLAG QRGIVGLPGQ RGERGFPGLP GPSGEPGKQG APGASGDRGP PGPVGPPGLT 
       970        980        990       1000       1010       1020 
GPAGEPGREG SPGADGPPGR DGAAGVKGDR GETGALGAPG APGPPGSPGP AGPTGKQGDR 
      1030       1040       1050       1060       1070       1080 
GEAGAQGPMG PSGPAGARGI AGPQGPRGDK GEAGEPGERG LKGHRGFTGL QGLPGPPGPS 
      1090       1100       1110       1120       1130       1140 
GDQGTSGPAG PSGPRGPPGP VGPSGKDGSN GIPGPIGPPG PRGRSGETGP AGPPGNPGPP 
      1150       1160       1170       1180       1190       1200 
GPPGPPGPGI DMSAFAGLGQ REKGPDPLQY MRADEADSTL RQHDVEVDAT LKSLNNQIES 
      1210       1220       1230       1240       1250       1260 
IRSPDGSRKN PARTCQDLKL CHPEWKSGDY WIDPNQGCTL DAMKVFCNME TGESCVYPNP 
      1270       1280       1290       1300       1310       1320 
ATVPRKNWWS SKSKEKKHIW FGETMNGGFH FSYGDGNLAP NTANVQMTFL RLLSTEGSQN 
      1330       1340       1350       1360       1370       1380 
ITYHCKNSIA YLDEAAGNLK KALLIQGSND VEMRAEGNSR FTYTALKDGC TKHTGKWGKT 
      1390       1400       1410    
IIEYRSQKTS RLPIVDIAPM DIGGPDQEFG VDIGPVCFL

Isoforms



Sequence View



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Protein Neighborhood

Domains & Features

2 N-termini - 2 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    P05539-114-unknown QMAGGF... 114 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    P05539-1174-unknown DEADST... 1174 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...QYMRAD 1173 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...PVCFL 1419 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)