TopFIND 4.0

P10247: H-2 class II histocompatibility antigen gamma chain

General Information

Protein names
- H-2 class II histocompatibility antigen gamma chain
- Ia antigen-associated invariant chain
- Ii
- MHC class II-associated invariant chain
- CD74
Gene names Cd74
Organism Rattus norvegicus
Protease Family
Protease ID I31.002
Chromosome location
UniProt ID P10247

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MDDQRDLISN HEQLPILGQR ARAPESNCNR GVLYTSVSVL VALLLAGQAT TAYFLYQQQG 
        70         80         90        100        110        120 
RLDKLTVTSQ NLQLENLRMK LPKSAKPVSP MRMATPLLMR PLSMDNMLQA PVKNVTKYGN 
       130        140        150        160        170        180 
MTQDHVMHLL TKSGPVNYPQ LKGSFPENLK HLKNSMNGLD WKVFESWMKQ WLLFEMSKNS 
       190        200        210        220        230        240 
LEEKQPTQTP PKVLTKCQEE VSHIPDVHPG AFRPKCDENG NYMPLQCHGS TGYCWCVFPN 
       250        260        270        280    
GTEVPHTKSR GRHNCSEPLD MEDPSSGLGV TKQDMGQMFL 

Isoforms

- Isoform Short of H-2 class II histocompatibility antigen gamma chain

Sequence View

        10         20         30         40         50         60 
MDDQRDLISN HEQLPILGQR ARAPESNCNR GVLYTSVSVL VALLLAGQAT TAYFLYQQQG 
        70         80         90        100        110        120 
RLDKLTVTSQ NLQLENLRMK LPKSAKPVSP MRMATPLLMR PLSMDNMLQA PVKNVTKYGN 
       130        140        150        160        170        180 
MTQDHVMHLL TKSGPVNYPQ LKGSFPENLK HLKNSMNGLD WKVFESWMKQ WLLFEMSKNS 
       190        200        210        220        230        240 
LEEKQPTQTP PKVLTKCQEE VSHIPDVHPG AFRPKCDENG NYMPLQCHGS TGYCWCVFPN 
       250        260        270        280    
GTEVPHTKSR GRHNCSEPLD MEDPSSGLGV TKQDMGQMFL 



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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    P10247-1-unknown MDDQRD... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    P10247-1-unknown MDDQRD... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt192747

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...GQMFL 280 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...GQMFL 280 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt152693

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)