TopFIND 4.0

P18616: DNA-directed RNA polymerase II subunit 1

General Information

Protein names
- DNA-directed RNA polymerase II subunit 1
- DNA-directed RNA polymerase II subunit RPB1
- DNA polymerase II subunit B1
- 2.7.7.6
- DNA-directed RNA polymerase III largest subunit
Gene names NRPB1
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID P18616

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MDTRFPFSPA EVSKVRVVQF GILSPDEIRQ MSVIHVEHSE TTEKGKPKVG GLSDTRLGTI 
        70         80         90        100        110        120 
DRKVKCETCM ANMAECPGHF GYLELAKPMY HVGFMKTVLS IMRCVCFNCS KILADEEEHK 
       130        140        150        160        170        180 
FKQAMKIKNP KNRLKKILDA CKNKTKCDGG DDIDDVQSHS TDEPVKKSRG GCGAQQPKLT 
       190        200        210        220        230        240 
IEGMKMIAEY KIQRKKNDEP DQLPEPAERK QTLGADRVLS VLKRISDADC QLLGFNPKFA 
       250        260        270        280        290        300 
RPDWMILEVL PIPPPPVRPS VMMDATSRSE DDLTHQLAMI IRHNENLKRQ EKNGAPAHII 
       310        320        330        340        350        360 
SEFTQLLQFH IATYFDNELP GQPRATQKSG RPIKSICSRL KAKEGRIRGN LMGKRVDFSA 
       370        380        390        400        410        420 
RTVITPDPTI NIDELGVPWS IALNLTYPET VTPYNIERLK ELVDYGPHPP PGKTGAKYII 
       430        440        450        460        470        480 
RDDGQRLDLR YLKKSSDQHL ELGYKVERHL QDGDFVLFNR QPSLHKMSIM GHRIRIMPYS 
       490        500        510        520        530        540 
TFRLNLSVTS PYNADFDGDE MNMHVPQSFE TRAEVLELMM VPKCIVSPQA NRPVMGIVQD 
       550        560        570        580        590        600 
TLLGCRKITK RDTFIEKDVF MNTLMWWEDF DGKVPAPAIL KPRPLWTGKQ VFNLIIPKQI 
       610        620        630        640        650        660 
NLLRYSAWHA DTETGFITPG DTQVRIERGE LLAGTLCKKT LGTSNGSLVH VIWEEVGPDA 
       670        680        690        700        710        720 
ARKFLGHTQW LVNYWLLQNG FTIGIGDTIA DSSTMEKINE TISNAKTAVK DLIRQFQGKE 
       730        740        750        760        770        780 
LDPEPGRTMR DTFENRVNQV LNKARDDAGS SAQKSLAETN NLKAMVTAGS KGSFINISQM 
       790        800        810        820        830        840 
TACVGQQNVE GKRIPFGFDG RTLPHFTKDD YGPESRGFVE NSYLRGLTPQ EFFFHAMGGR 
       850        860        870        880        890        900 
EGLIDTAVKT SETGYIQRRL VKAMEDIMVK YDGTVRNSLG DVIQFLYGED GMDAVWIESQ 
       910        920        930        940        950        960 
KLDSLKMKKS EFDRTFKYEI DDENWNPTYL SDEHLEDLKG IRELRDVFDA EYSKLETDRF 
       970        980        990       1000       1010       1020 
QLGTEIATNG DSTWPLPVNI KRHIWNAQKT FKIDLRKISD MHPVEIVDAV DKLQERLLVV 
      1030       1040       1050       1060       1070       1080 
PGDDALSVEA QKNATLFFNI LLRSTLASKR VLEEYKLSRE AFEWVIGEIE SRFLQSLVAP 
      1090       1100       1110       1120       1130       1140 
GEMIGCVAAQ SIGEPATQMT LNTFHYAGVS AKNVTLGVPR LREIINVAKR IKTPSLSVYL 
      1150       1160       1170       1180       1190       1200 
TPEASKSKEG AKTVQCALEY TTLRSVTQAT EVWYDPDPMS TIIEEDFEFV RSYYEMPDED 
      1210       1220       1230       1240       1250       1260 
VSPDKISPWL LRIELNREMM VDKKLSMADI AEKINLEFDD DLTCIFNDDN AQKLILRIRI 
      1270       1280       1290       1300       1310       1320 
MNDEGPKGEL QDESAEDDVF LKKIESNMLT EMALRGIPDI NKVFIKQVRK SRFDEEGGFK 
      1330       1340       1350       1360       1370       1380 
TSEEWMLDTE GVNLLAVMCH EDVDPKRTTS NHLIEIIEVL GIEAVRRALL DELRVVISFD 
      1390       1400       1410       1420       1430       1440 
GSYVNYRHLA ILCDTMTYRG HLMAITRHGI NRNDTGPLMR CSFEETVDIL LDAAAYAETD 
      1450       1460       1470       1480       1490       1500 
CLRGVTENIM LGQLAPIGTG DCELYLNDEM LKNAIELQLP SYMDGLEFGM TPARSPVSGT 
      1510       1520       1530       1540       1550       1560 
PYHEGMMSPN YLLSPNMRLS PMSDAQFSPY VGGMAFSPSS SPGYSPSSPG YSPTSPGYSP 
      1570       1580       1590       1600       1610       1620 
TSPGYSPTSP GYSPTSPTYS PSSPGYSPTS PAYSPTSPSY SPTSPSYSPT SPSYSPTSPS 
      1630       1640       1650       1660       1670       1680 
YSPTSPSYSP TSPSYSPTSP AYSPTSPAYS PTSPAYSPTS PSYSPTSPSY SPTSPSYSPT 
      1690       1700       1710       1720       1730       1740 
SPSYSPTSPS YSPTSPAYSP TSPGYSPTSP SYSPTSPSYG PTSPSYNPQS AKYSPSIAYS 
      1750       1760       1770       1780       1790       1800 
PSNARLSPAS PYSPTSPNYS PTSPSYSPTS PSYSPSSPTY SPSSPYSSGA SPDYSPSAGY 
      1810       1820       1830    
SPTLPGYSPS STGQYTPHEG DKKDKTGKKD ASKDDKGNP

Isoforms



Sequence View



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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    P18616-1-unknown MDTRFP... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...DKGNP 1839 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)