TopFIND 4.0

P55135: 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}

General Information

Protein names
- 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}
- 2.1.1.190 {ECO:0000255|HAMAP-Rule:MF_01010}
- 23S rRNA(m5U1939)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01010}
Gene names rlmD
Organism Escherichia coli
Protease Family
Protease ID
Chromosome location
UniProt ID P55135

1

N-termini

1

C-termini

1

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MAQFYSAKRR TTTRQIITVS VNDLDSFGQG VARHNGKTLF IPGLLPQENA EVTVTEDKKQ 
        70         80         90        100        110        120 
YARAKVVRRL SDSPERETPR CPHFGVCGGC QQQHASVDLQ QRSKSAALAR LMKHDVSEVI 
       130        140        150        160        170        180 
ADVPWGYRRR ARLSLNYLPK TQQLQMGFRK AGSSDIVDVK QCPILAPQLE ALLPKVRACL 
       190        200        210        220        230        240 
GSLQAMRHLG HVELVQATSG TLMILRHTAP LSSADREKLE RFSHSEGLDL YLAPDSEILE 
       250        260        270        280        290        300 
TVSGEMPWYD SNGLRLTFSP RDFIQVNAGV NQKMVARALE WLDVQPEDRV LDLFCGMGNF 
       310        320        330        340        350        360 
TLPLATQAAS VVGVEGVPAL VEKGQQNARL NGLQNVTFYH ENLEEDVTKQ PWAKNGFDKV 
       370        380        390        400        410        420 
LLDPARAGAA GVMQQIIKLE PIRIVYVSCN PATLARDSEA LLKAGYTIAR LAMLDMFPHT 
       430    
GHLESMVLFS RVK

Isoforms



Sequence View



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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 1 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    P55135-2-unknown AQFYSA... 2 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    P55135-2-unknown AQFYSA... 2 inferred from cleavage unknown TopFIND Inferred from cleavage TC28272

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...FSRVK 433 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)