TopFIND 4.0

P94077: Protein LSD1

General Information

Protein names
- Protein LSD1
- Protein CHILLING SENSITIVE 4
- Protein LESION SIMULATING DISEASE 1
- AtLSD1
- Putative zinc finger LSD1
Gene names LSD1
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID P94077

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MKVADMQDQL VCHGCRNLLM YPRGASNVRC ALCNTINMVP PPPPPHDMAH IICGGCRTML 
        70         80         90        100        110        120 
MYTRGASSVR CSCCQTTNLV PAHSNQVAHA PSSQVAQINC GHCRTTLMYP YGASSVKCAV 
       130        140        150        160        170        180 
CQFVTNVNMS NGRVPLPTNR PNGTACPPST STSTPPSQTQ TVVVENPMSV DESGKLVSNV 
   
VVGVTTDKK

Isoforms

- Isoform 2 of Protein LSD1

Sequence View

        10         20         30         40         50         60 
MKVADMQDQL VCHGCRNLLM YPRGASNVRC ALCNTINMVP PPPPPHDMAH IICGGCRTML 
        70         80         90        100        110        120 
MYTRGASSVR CSCCQTTNLV PAHSNQVAHA PSSQVAQINC GHCRTTLMYP YGASSVKCAV 
       130        140        150        160        170        180 
CQFVTNVNMS NGRVPLPTNR PNGTACPPST STSTPPSQTQ TVVVENPMSV DESGKLVSNV 
   
VVGVTTDKK



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Protease Assignment Confidence:


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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    P94077-1-unknown MKVADM... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    P94077-6-unknown MQDQLV... 6 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt79999

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...TTDKK 189 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...TTDKK 189 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt75617

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)