TopFIND 4.0

P97358: TATA box-binding protein-associated factor RNA polymerase I subunit B

General Information

Protein names
- TATA box-binding protein-associated factor RNA polymerase I subunit B
- RNA polymerase I-specific TBP-associated factor 68 kDa
- TAFI68
- TATA box-binding protein-associated factor 1B
- TBP-associated factor 1B
- Transcription initiation factor SL1/TIF-IB subunit B
Gene names Taf1b
Organism Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID P97358

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MDVEEVKAFR DRCSQCAAVS WGLTDEGKYY CTSCHNVTDR SEEVVSAADI PNTKINSINR 
        70         80         90        100        110        120 
GLRQRSKHEK GWDWYVCEGF QCILYHQAKA LETLGVSPEL KNEVLHNFWK RYLQKSKQAY 
       130        140        150        160        170        180 
CKNPVRTSGR KAKVLEDSVQ SSDLGSDLEL LSDTTCPLES EAEFQSDPQI PKPFPVTKGS 
       190        200        210        220        230        240 
PKSASVCSGS VDGVEYSERK EKGLVKMTVP RTLALCSLSL LWQRETITVS DLLRFVEEDH 
       250        260        270        280        290        300 
IPYINAFKLF PEEMKVYGRD KGIFAIESWP DYEDIYKNMI ELAIFLDLPR FPDITEDCYL 
       310        320        330        340        350        360 
HPNTLCMKYL LEVNLPDEMH TLTCQVVKLT GIGEVDFLTF DPIAKTKRTV KYDVQAMAVI 
       370        380        390        400        410        420 
VVVLKLLFLL DDKLEWSYSD LAEAYNEQHR EDTPQFDFRK WYQVMKKTFD EKRRKWEEAR 
       430        440        450        460        470        480 
ARYAWKTKRP LYRSHIDKSV AYKRRKMVEN LQKQFSALVG SSPVVEKQAP SSFQFNWTEE 
       490        500        510        520        530        540 
GTDSPCFHGH SLQGLLIMKG QSMITKNSLY WLSTQKFCKS YCKHVTTYEE SNFSLSYQFI 
       550        560        570        580    
LNIFSFLLRI KTSALHEEVS LLEKKLFEKK YNESKKSSGS KKGRRH

Isoforms

- Isoform 2 of TATA box-binding protein-associated factor RNA polymerase I subunit B

Sequence View

        10         20         30         40         50         60 
MDVEEVKAFR DRCSQCAAVS WGLTDEGKYY CTSCHNVTDR SEEVVSAADI PNTKINSINR 
        70         80         90        100        110        120 
GLRQRSKHEK GWDWYVCEGF QCILYHQAKA LETLGVSPEL KNEVLHNFWK RYLQKSKQAY 
       130        140        150        160        170        180 
CKNPVRTSGR KAKVLEDSVQ SSDLGSDLEL LSDTTCPLES EAEFQSDPQI PKPFPVTKGS 
       190        200        210        220        230        240 
PKSASVCSGS VDGVEYSERK EKGLVKMTVP RTLALCSLSL LWQRETITVS DLLRFVEEDH 
       250        260        270        280        290        300 
IPYINAFKLF PEEMKVYGRD KGIFAIESWP DYEDIYKNMI ELAIFLDLPR FPDITEDCYL 
       310        320        330        340        350        360 
HPNTLCMKYL LEVNLPDEMH TLTCQVVKLT GIGEVDFLTF DPIAKTKRTV KYDVQAMAVI 
       370        380        390        400        410        420 
VVVLKLLFLL DDKLEWSYSD LAEAYNEQHR EDTPQFDFRK WYQVMKKTFD EKRRKWEEAR 
       430        440        450        460        470        480 
ARYAWKTKRP LYRSHIDKSV AYKRRKMVEN LQKQFSALVG SSPVVEKQAP SSFQFNWTEE 
       490        500        510        520        530        540 
GTDSPCFHGH SLQGLLIMKG QSMITKNSLY WLSTQKFCKS YCKHVTTYEE SNFSLSYQFI 
       550        560        570        580    
LNIFSFLLRI KTSALHEEVS LLEKKLFEKK YNESKKSSGS KKGRRH



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Protease Assignment Confidence:


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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    P97358-1-Acetylation MDVEEV... 1 acetylation- inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    P97358-7-unknown KAFRDR... 7 inferred from electronic annotation unknown TISdb inferred from TISdb

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...KGRRH 586 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...KGRRH 586 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt87063

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)