TopFIND 4.0

Q06643: Lymphotoxin-beta

General Information

Protein names
- Lymphotoxin-beta
- LT-beta
- Tumor necrosis factor C
- TNF-C
- Tumor necrosis factor ligand superfamily member 3
Gene names LTB
Organism Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID Q06643

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MGALGLEGRG GRLQGRGSLL LAVAGATSLV TLLLAVPITV LAVLALVPQD QGGLVTETAD 
        70         80         90        100        110        120 
PGAQAQQGLG FQKLPEEEPE TDLSPGLPAA HLIGAPLKGQ GLGWETTKEQ AFLTSGTQFS 
       130        140        150        160        170        180 
DAEGLALPQD GLYYLYCLVG YRGRAPPGGG DPQGRSVTLR SSLYRAGGAY GPGTPELLLE 
       190        200        210        220        230        240 
GAETVTPVLD PARRQGYGPL WYTSVGFGGL VQLRRGERVY VNISHPDMVD FARGKTFFGA 
   
VMVG

Isoforms

- Isoform 2 of Lymphotoxin-beta

Sequence View

        10         20         30         40         50         60 
MGALGLEGRG GRLQGRGSLL LAVAGATSLV TLLLAVPITV LAVLALVPQD QGGLVTETAD 
        70         80         90        100        110        120 
PGAQAQQGLG FQKLPEEEPE TDLSPGLPAA HLIGAPLKGQ GLGWETTKEQ AFLTSGTQFS 
       130        140        150        160        170        180 
DAEGLALPQD GLYYLYCLVG YRGRAPPGGG DPQGRSVTLR SSLYRAGGAY GPGTPELLLE 
       190        200        210        220        230        240 
GAETVTPVLD PARRQGYGPL WYTSVGFGGL VQLRRGERVY VNISHPDMVD FARGKTFFGA 
   
VMVG



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(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q06643-1-unknown MGALGL... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q06643-1-unknown MGALGL... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt92601

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...AVMVG 244 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)