TopFIND 4.0

Q07563: Collagen alpha-1(XVII) chain

General Information

Protein names
- Collagen alpha-1(XVII) chain
- 180 kDa bullous pemphigoid antigen 2
- Bullous pemphigoid antigen 2
- 120 kDa linear IgA disease antigen homolog
Gene names Col17a1
Organism Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID Q07563

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MDVTKKSKRD GTEVTERIVT ETVTTRLTSL PPKGSTSNGY AKTGSLGGGS RLEKQSLTHG 
        70         80         90        100        110        120 
SSGYINSSGS IRGNASTSSY RRTHSPASTL PNSPGSTFER KAHMTRHGTY EGSSSGNSSP 
       130        140        150        160        170        180 
EYPRKELASS STRGRSQTRE SEIRVRLQSA SPSTRWTELD EVKRLLKGSR SASASPTRNT 
       190        200        210        220        230        240 
SNTLPIPKKG TVETKTVTAS SHSVSGTYDS AILDTNFPPH MWSSTLPAGS SLGTYQNNIT 
       250        260        270        280        290        300 
AQSTSLLNTN AYSTGSVFGV PNNMASCSPT LHPGLSSCSS VFGMQNNLAP SSSVLSHGTT 
       310        320        330        340        350        360 
TASTAYGAKK NVPQPPTVTS TGVSTSATCT TSVQSDDLLH KDCKFLILEK DNTPAKKEME 
       370        380        390        400        410        420 
LLIMTKDSGK VFTASPATIS STSFSEDTLK KEKQAAYAAD TCLKADVNGD LNTVSTKSKM 
       430        440        450        460        470        480 
TSAENHGYDR GGGGGRGKGG GAGGGGGGGG ASGGGGAWGA APAWCPCGSC CSWWKWLLGL 
       490        500        510        520        530        540 
LLTWLLLLGL LFGLIALAEE VRKLKARVEE LEKTKVLYHD VQMDKSNRDR LQAEAPSLGP 
       550        560        570        580        590        600 
GLGKAELDGY SQEAIWLFVR NKLMTEQENG NLRGSPGPKG DMGSQGPKGD RGLPGTPGIP 
       610        620        630        640        650        660 
GPLGHPGPEG PKGQKGSIGD PGMEGPIGQR GLAGPMGPRG EPGPPGSGEK GDRGIAGEQG 
       670        680        690        700        710        720 
PQGLPGVPGP PGLRGHSGSP GPQGPPGAVG PQGLRGDVGL PGVKGDKGLM GPPGPKGDQG 
       730        740        750        760        770        780 
EKGPRGLTGE PGIRGLPGAV GEPGAKGAMG PAGADGQQGS RGEQGLTGMP GTRGPPGPAG 
       790        800        810        820        830        840 
DPGKPGLTGP QGPQGLPGSP GRPGTKGEPG APGRVMTSEG SSTITVPGPP GPPGAMGPPG 
       850        860        870        880        890        900 
PPGTPGPAGP AGLPGQQGPR GEPGLAGDSF LSSGSSISEV LSAQGVDLRG PPGPPGPRGP 
       910        920        930        940        950        960 
PGPSIPGPPG PRGPPGEGVP GPPGPPGSFL TDSETFFTGP PGPPGPPGPK GDQGDPGVPG 
       970        980        990       1000       1010       1020 
TPGISGGLSH GASSSTLYMQ GPPGPPGPPG PPGSLSSSGQ DIQHYIAEYM QSDNIRTYLS 
      1030       1040       1050       1060       1070       1080 
GVQGPPGPPG PPGPVITITG ETFDYSQLAS QVVSYLRSSG YGAGLSSASS SEDILAMLRR 
      1090       1100       1110       1120       1130       1140 
NDVWQYLRQN LVGPPGPPGP PGVSGDGSLL SLDYGELSRH ILNYMSSSGI SFGHPGPPGP 
      1150       1160       1170       1180       1190       1200 
PGLPGTSYEE LLTMLRGSDY RNIIGPPGPP GPPGMPGNAW SSISVEDLSS YLHTAGLSSI 
      1210       1220       1230       1240       1250       1260 
PGPPGPPGPP GPRGPPGVSA ALSTYAAENS DNFRSELISY LTSPDVRSFI VGPPGPPGPQ 
      1270       1280       1290       1300       1310       1320 
GPPGDGHLRE NYNWSSNSSA RRGTSYSSST GTGGTNGGSL GEGGAYGAGD GGPYGTDIGP 
      1330       1340       1350       1360       1370       1380 
GGGYGAAAGG GIYGTNGDSF RDGFTGDLDY NKLAVRVSES MQRQGLLQGM AYTVQGPPGP 
      1390       1400       1410       1420       1430       1440 
QGPPGISRVF SAYSNVTQDL MDFFQTYGTI PGPPGQKGDV GTPGPKGDRG PAGPRGPPGP 
      1450       1460       1470    
PGPRGNKGEK GDKGDQVYTG RRKRSIAIKP 

Isoforms

- Isoform 2 of Collagen alpha-1(XVII) chain

Sequence View

        10         20         30         40         50         60 
MDVTKKSKRD GTEVTERIVT ETVTTRLTSL PPKGSTSNGY AKTGSLGGGS RLEKQSLTHG 
        70         80         90        100        110        120 
SSGYINSSGS IRGNASTSSY RRTHSPASTL PNSPGSTFER KAHMTRHGTY EGSSSGNSSP 
       130        140        150        160        170        180 
EYPRKELASS STRGRSQTRE SEIRVRLQSA SPSTRWTELD EVKRLLKGSR SASASPTRNT 
       190        200        210        220        230        240 
SNTLPIPKKG TVETKTVTAS SHSVSGTYDS AILDTNFPPH MWSSTLPAGS SLGTYQNNIT 
       250        260        270        280        290        300 
AQSTSLLNTN AYSTGSVFGV PNNMASCSPT LHPGLSSCSS VFGMQNNLAP SSSVLSHGTT 
       310        320        330        340        350        360 
TASTAYGAKK NVPQPPTVTS TGVSTSATCT TSVQSDDLLH KDCKFLILEK DNTPAKKEME 
       370        380        390        400        410        420 
LLIMTKDSGK VFTASPATIS STSFSEDTLK KEKQAAYAAD TCLKADVNGD LNTVSTKSKM 
       430        440        450        460        470        480 
TSAENHGYDR GGGGGRGKGG GAGGGGGGGG ASGGGGAWGA APAWCPCGSC CSWWKWLLGL 
       490        500        510        520        530        540 
LLTWLLLLGL LFGLIALAEE VRKLKARVEE LEKTKVLYHD VQMDKSNRDR LQAEAPSLGP 
       550        560        570        580        590        600 
GLGKAELDGY SQEAIWLFVR NKLMTEQENG NLRGSPGPKG DMGSQGPKGD RGLPGTPGIP 
       610        620        630        640        650        660 
GPLGHPGPEG PKGQKGSIGD PGMEGPIGQR GLAGPMGPRG EPGPPGSGEK GDRGIAGEQG 
       670        680        690        700        710        720 
PQGLPGVPGP PGLRGHSGSP GPQGPPGAVG PQGLRGDVGL PGVKGDKGLM GPPGPKGDQG 
       730        740        750        760        770        780 
EKGPRGLTGE PGIRGLPGAV GEPGAKGAMG PAGADGQQGS RGEQGLTGMP GTRGPPGPAG 
       790        800        810        820        830        840 
DPGKPGLTGP QGPQGLPGSP GRPGTKGEPG APGRVMTSEG SSTITVPGPP GPPGAMGPPG 
       850        860        870        880        890        900 
PPGTPGPAGP AGLPGQQGPR GEPGLAGDSF LSSGSSISEV LSAQGVDLRG PPGPPGPRGP 
       910        920        930        940        950        960 
PGPSIPGPPG PRGPPGEGVP GPPGPPGSFL TDSETFFTGP PGPPGPPGPK GDQGDPGVPG 
       970        980        990       1000       1010       1020 
TPGISGGLSH GASSSTLYMQ GPPGPPGPPG PPGSLSSSGQ DIQHYIAEYM QSDNIRTYLS 
      1030       1040       1050       1060       1070       1080 
GVQGPPGPPG PPGPVITITG ETFDYSQLAS QVVSYLRSSG YGAGLSSASS SEDILAMLRR 
      1090       1100       1110       1120       1130       1140 
NDVWQYLRQN LVGPPGPPGP PGVSGDGSLL SLDYGELSRH ILNYMSSSGI SFGHPGPPGP 
      1150       1160       1170       1180       1190       1200 
PGLPGTSYEE LLTMLRGSDY RNIIGPPGPP GPPGMPGNAW SSISVEDLSS YLHTAGLSSI 
      1210       1220       1230       1240       1250       1260 
PGPPGPPGPP GPRGPPGVSA ALSTYAAENS DNFRSELISY LTSPDVRSFI VGPPGPPGPQ 
      1270       1280       1290       1300       1310       1320 
GPPGDGHLRE NYNWSSNSSA RRGTSYSSST GTGGTNGGSL GEGGAYGAGD GGPYGTDIGP 
      1330       1340       1350       1360       1370       1380 
GGGYGAAAGG GIYGTNGDSF RDGFTGDLDY NKLAVRVSES MQRQGLLQGM AYTVQGPPGP 
      1390       1400       1410       1420       1430       1440 
QGPPGISRVF SAYSNVTQDL MDFFQTYGTI PGPPGQKGDV GTPGPKGDRG PAGPRGPPGP 
      1450       1460       1470    
PGPRGNKGEK GDKGDQVYTG RRKRSIAIKP 



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q07563-1-unknown MDVTKK... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q07563-1-unknown MDVTKK... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt71377
    Q07563-531-unknown LQAEAP... 531 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q07563-531-unknown LQAEAP... 531 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt116232

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...IAIKP 1470 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...IAIKP 1470 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt66995

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)