TopFIND 4.0

Q07699: Sodium channel subunit beta-1

General Information

Protein names
- Sodium channel subunit beta-1
Gene names SCN1B
Organism Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID Q07699

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MGRLLALVVG AALVSSACGG CVEVDSETEA VYGMTFKILC ISCKRRSETN AETFTEWTFR 
        70         80         90        100        110        120 
QKGTEEFVKI LRYENEVLQL EEDERFEGRV VWNGSRGTKD LQDLSIFITN VTYNHSGDYE 
       130        140        150        160        170        180 
CHVYRLLFFE NYEHNTSVVK KIHIEVVDKA NRDMASIVSE IMMYVLIVVL TIWLVAEMIY 
       190        200        210    
CYKKIAAATE TAAQENASEY LAITSESKEN CTGVQVAE

Isoforms

- Isoform 2 of Sodium channel subunit beta-1

Sequence View

        10         20         30         40         50         60 
MGRLLALVVG AALVSSACGG CVEVDSETEA VYGMTFKILC ISCKRRSETN AETFTEWTFR 
        70         80         90        100        110        120 
QKGTEEFVKI LRYENEVLQL EEDERFEGRV VWNGSRGTKD LQDLSIFITN VTYNHSGDYE 
       130        140        150        160        170        180 
CHVYRLLFFE NYEHNTSVVK KIHIEVVDKA NRDMASIVSE IMMYVLIVVL TIWLVAEMIY 
       190        200        210    
CYKKIAAATE TAAQENASEY LAITSESKEN CTGVQVAE



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Biological System:


Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q07699-1-unknown MGRLLA... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt89057
    Q07699-19-unknown GGCVEV... 19 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q07699-19-unknown GGCVEV... 19 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt112246

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...VQVAE 218 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)