TopFIND 4.0

Q38933: Lycopene beta cyclase, chloroplastic {ECO:0000303|PubMed:8837512}

General Information

Protein names
- Lycopene beta cyclase, chloroplastic {ECO:0000303|PubMed:8837512}
- 5.5.1.19 {ECO:0000269|PubMed:8837512}
- AtLCY {ECO:0000303|PubMed:21471119}
- Protein SUPPRESSOR OF ZEAXANTHIN-LESS 1 {ECO:0000303|PubMed:19549928}
Gene names LCY1
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q38933

3

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MDTLLKTPNK LDFFIPQFHG FERLCSNNPY HSRVRLGVKK RAIKIVSSVV SGSAALLDLV 
        70         80         90        100        110        120 
PETKKENLDF ELPLYDTSKS QVVDLAIVGG GPAGLAVAQQ VSEAGLSVCS IDPSPKLIWP 
       130        140        150        160        170        180 
NNYGVWVDEF EAMDLLDCLD TTWSGAVVYV DEGVKKDLSR PYGRVNRKQL KSKMLQKCIT 
       190        200        210        220        230        240 
NGVKFHQSKV TNVVHEEANS TVVCSDGVKI QASVVLDATG FSRCLVQYDK PYNPGYQVAY 
       250        260        270        280        290        300 
GIVAEVDGHP FDVDKMVFMD WRDKHLDSYP ELKERNSKIP TFLYAMPFSS NRIFLEETSL 
       310        320        330        340        350        360 
VARPGLRMED IQERMAARLK HLGINVKRIE EDERCVIPMG GPLPVLPQRV VGIGGTAGMV 
       370        380        390        400        410        420 
HPSTGYMVAR TLAAAPIVAN AIVRYLGSPS SNSLRGDQLS AEVWRDLWPI ERRRQREFFC 
       430        440        450        460        470        480 
FGMDILLKLD LDATRRFFDA FFDLQPHYWH GFLSSRLFLP ELLVFGLSLF SHASNTSRLE 
       490        500    
IMTKGTVPLA KMINNLVQDR D

Isoforms

- Isoform 2 of Lycopene beta cyclase, chloroplastic

Sequence View

        10         20         30         40         50         60 
MDTLLKTPNK LDFFIPQFHG FERLCSNNPY HSRVRLGVKK RAIKIVSSVV SGSAALLDLV 
        70         80         90        100        110        120 
PETKKENLDF ELPLYDTSKS QVVDLAIVGG GPAGLAVAQQ VSEAGLSVCS IDPSPKLIWP 
       130        140        150        160        170        180 
NNYGVWVDEF EAMDLLDCLD TTWSGAVVYV DEGVKKDLSR PYGRVNRKQL KSKMLQKCIT 
       190        200        210        220        230        240 
NGVKFHQSKV TNVVHEEANS TVVCSDGVKI QASVVLDATG FSRCLVQYDK PYNPGYQVAY 
       250        260        270        280        290        300 
GIVAEVDGHP FDVDKMVFMD WRDKHLDSYP ELKERNSKIP TFLYAMPFSS NRIFLEETSL 
       310        320        330        340        350        360 
VARPGLRMED IQERMAARLK HLGINVKRIE EDERCVIPMG GPLPVLPQRV VGIGGTAGMV 
       370        380        390        400        410        420 
HPSTGYMVAR TLAAAPIVAN AIVRYLGSPS SNSLRGDQLS AEVWRDLWPI ERRRQREFFC 
       430        440        450        460        470        480 
FGMDILLKLD LDATRRFFDA FFDLQPHYWH GFLSSRLFLP ELLVFGLSLF SHASNTSRLE 
       490        500    
IMTKGTVPLA KMINNLVQDR D



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

3 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...VQDRD 501 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...VQDRD 501 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt75070

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)