TopFIND 4.0

Q3EBD3: DEAD-box ATP-dependent RNA helicase 41

General Information

Protein names
- DEAD-box ATP-dependent RNA helicase 41
- 3.6.4.13
Gene names RH41
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q3EBD3

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MNEEGCVPHN SDVVKQKSID QRAPLSGEPK CVICSRYGEY ICDETNDDVC SLECKQALLR 
        70         80         90        100        110        120 
RVDSARVFPA TDECFYVRDP GSSSHDAQLL RRKLDIHVQG QGSAVPPPVL TFTSCGLPPK 
       130        140        150        160        170        180 
LLLNLETAGY DFPTPIQMQA IPAALTGKSL LASADTGSGK TASFLVPIIS RCTTYHSEHP 
       190        200        210        220        230        240 
SDQRRNPLAM VLAPTRELCV QVEDQAKMLG KGLPFKTALV VGGDPMSGQL YRIQQGVELI 
       250        260        270        280        290        300 
IGTPGRVVDL LSKHTIELDN IMTFVLDEVD CMLQRGFRDQ VMQIFQALSQ PQVLLFSATI 
       310        320        330        340        350        360 
SREVEKVGGS LAKEIILVSI GNPNKPNKAV NQLAIWVDAK QKKQKLFDIL RSQNHFKPPA 
       370        380        390        400        410        420 
VVYVSSRVGA DLLANAITVV TGVKALSIHG EKPMKERRDV MGSFLGGEVP VLVSTGVLGR 
       430        440        450        460        470        480 
GVDLLVVRQV IVFDMPSTIK EYIHVIGRAS RMGEKGTAIV FVNEDDRNLF PDLVAALKSS 
       490        500    
GAAIPKELIN LTSREMHNKK RRVGY

Isoforms

- Isoform 2 of DEAD-box ATP-dependent RNA helicase 41

Sequence View

        10         20         30         40         50         60 
MNEEGCVPHN SDVVKQKSID QRAPLSGEPK CVICSRYGEY ICDETNDDVC SLECKQALLR 
        70         80         90        100        110        120 
RVDSARVFPA TDECFYVRDP GSSSHDAQLL RRKLDIHVQG QGSAVPPPVL TFTSCGLPPK 
       130        140        150        160        170        180 
LLLNLETAGY DFPTPIQMQA IPAALTGKSL LASADTGSGK TASFLVPIIS RCTTYHSEHP 
       190        200        210        220        230        240 
SDQRRNPLAM VLAPTRELCV QVEDQAKMLG KGLPFKTALV VGGDPMSGQL YRIQQGVELI 
       250        260        270        280        290        300 
IGTPGRVVDL LSKHTIELDN IMTFVLDEVD CMLQRGFRDQ VMQIFQALSQ PQVLLFSATI 
       310        320        330        340        350        360 
SREVEKVGGS LAKEIILVSI GNPNKPNKAV NQLAIWVDAK QKKQKLFDIL RSQNHFKPPA 
       370        380        390        400        410        420 
VVYVSSRVGA DLLANAITVV TGVKALSIHG EKPMKERRDV MGSFLGGEVP VLVSTGVLGR 
       430        440        450        460        470        480 
GVDLLVVRQV IVFDMPSTIK EYIHVIGRAS RMGEKGTAIV FVNEDDRNLF PDLVAALKSS 
       490        500    
GAAIPKELIN LTSREMHNKK RRVGY



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Evidence Names:


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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q3EBD3-1-unknown MNEEGC... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q3EBD3-138-unknown MQAIPA... 138 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt87544

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...RRVGY 505 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...RRVGY 505 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt83162

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)