TopFIND 4.0

Q3ECD0: RNA pseudouridine synthase 2, chloroplastic

General Information

Protein names
- RNA pseudouridine synthase 2, chloroplastic
- 5.4.99.-
- RNA pseudouridylate synthase 2
- RNA-uridine isomerase 2
Gene names
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q3ECD0

2

N-termini

2

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MLSISQLPSF SLTTAKSLRY PSSPSSSLSI FFSFFPKVSN FVRASSGIPN LVACSPTEII 
        70         80         90        100        110        120 
IPRVNNAGLR IEEIVDAAKG KIRLDSWISS RINGVSRARV QSSIRLGLVT VNGRVVDKVS 
       130        140        150        160        170        180 
HNVKSGDEVN CTISELQPLK AEAEDIPLDI VYEDKHVLVV NKPAHMVVHP APGNPTGTLV 
       190        200        210        220        230        240 
NGILHHCSLP CVDYSNSEED DDSDEETFSD DEEMTTSPSS YAASVRPGIV HRLDKGTTGL 
       250        260        270        280        290        300 
LVVAKDEHSH AHLAEQFKLH TIERVYVSLT TGVPSPPQGR IEIPIGRDSS NRIRMAAIPG 
       310        320        330        340        350        360 
GVRGGRARHA ASRYKVIETF AGGGSALVEW RLETGRTHQI RAHAKYMGVP LLGDEVYGGT 
       370        380        390        400        410        420 
KSMALSLLQK RVSRSDQEEI IELISRMDRP CLHAIVLGFT HPCTGEIVKF SCPPPSDLAE 
       430    
IVGLLRRSGL 

Isoforms

- Isoform 2 of RNA pseudouridine synthase 2, chloroplastic

Sequence View

        10         20         30         40         50         60 
MLSISQLPSF SLTTAKSLRY PSSPSSSLSI FFSFFPKVSN FVRASSGIPN LVACSPTEII 
        70         80         90        100        110        120 
IPRVNNAGLR IEEIVDAAKG KIRLDSWISS RINGVSRARV QSSIRLGLVT VNGRVVDKVS 
       130        140        150        160        170        180 
HNVKSGDEVN CTISELQPLK AEAEDIPLDI VYEDKHVLVV NKPAHMVVHP APGNPTGTLV 
       190        200        210        220        230        240 
NGILHHCSLP CVDYSNSEED DDSDEETFSD DEEMTTSPSS YAASVRPGIV HRLDKGTTGL 
       250        260        270        280        290        300 
LVVAKDEHSH AHLAEQFKLH TIERVYVSLT TGVPSPPQGR IEIPIGRDSS NRIRMAAIPG 
       310        320        330        340        350        360 
GVRGGRARHA ASRYKVIETF AGGGSALVEW RLETGRTHQI RAHAKYMGVP LLGDEVYGGT 
       370        380        390        400        410        420 
KSMALSLLQK RVSRSDQEEI IELISRMDRP CLHAIVLGFT HPCTGEIVKF SCPPPSDLAE 
       430    
IVGLLRRSGL 



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 2 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q3ECD0-1-unknown MLSISQ... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt86681
    Q3ECD0-44-unknown ASSGIP... 44 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q3ECD0-44-unknown ASSGIP... 44 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt115511

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...HAASRY 313 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt82299
    ...RRSGL 430 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)