TopFIND 4.0

Q45KJ6: Protein lin-28 homolog B

General Information

Protein names
- Protein lin-28 homolog B
- Lin-28B
Gene names Lin28b
Organism Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID Q45KJ6

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MAEGGASKGE EPEKLPGLAE DEPQVLHGTG HCKWFNVRMG FGFISMISRE GNPLDIPVDV 
        70         80         90        100        110        120 
FVHQSKLFME GFRSLKEGEP VEFTFKKSPK GLESIRVTGP GGSPCLGSER RPKGKTLQKR 
       130        140        150        160        170        180 
KPKGDRCYNC GGLDHHAKEC SLPPQPKKCH YCQSIMHMVA NCPHKLAAQL PASSQGRQEA 
       190        200        210        220        230        240 
ESQPCSSAAP REVGGGHGCT VLFPQEVKSE MAEHSDRSPQ EVSSTKAFAA IGEQNKKGPL 
   
IQKRKKT

Isoforms

- Isoform 2 of Protein lin-28 homolog B - Isoform 3 of Protein lin-28 homolog B - Isoform 4 of Protein lin-28 homolog B

Sequence View

        10         20         30         40         50         60 
MAEGGASKGE EPEKLPGLAE DEPQVLHGTG HCKWFNVRMG FGFISMISRE GNPLDIPVDV 
        70         80         90        100        110        120 
FVHQSKLFME GFRSLKEGEP VEFTFKKSPK GLESIRVTGP GGSPCLGSER RPKGKTLQKR 
       130        140        150        160        170        180 
KPKGDRCYNC GGLDHHAKEC SLPPQPKKCH YCQSIMHMVA NCPHKLAAQL PASSQGRQEA 
       190        200        210        220        230        240 
ESQPCSSAAP REVGGGHGCT VLFPQEVKSE MAEHSDRSPQ EVSSTKAFAA IGEQNKKGPL 
   
IQKRKKT         10         20         30         40         50         60 
MAEGGASKGE EPEKLPGLAE DEPQVLHGTG HCKWFNVRMG FGFISMISRE GNPLDIPVDV 
        70         80         90        100        110        120 
FVHQSKLFME GFRSLKEGEP VEFTFKKSPK GLESIRVTGP GGSPCLGSER RPKGKTLQKR 
       130        140        150        160        170        180 
KPKGDRCYNC GGLDHHAKEC SLPPQPKKCH YCQSIMHMVA NCPHKLAAQL PASSQGRQEA 
       190        200        210        220        230        240 
ESQPCSSAAP REVGGGHGCT VLFPQEVKSE MAEHSDRSPQ EVSSTKAFAA IGEQNKKGPL 
   
IQKRKKT         10         20         30         40         50         60 
MAEGGASKGE EPEKLPGLAE DEPQVLHGTG HCKWFNVRMG FGFISMISRE GNPLDIPVDV 
        70         80         90        100        110        120 
FVHQSKLFME GFRSLKEGEP VEFTFKKSPK GLESIRVTGP GGSPCLGSER RPKGKTLQKR 
       130        140        150        160        170        180 
KPKGDRCYNC GGLDHHAKEC SLPPQPKKCH YCQSIMHMVA NCPHKLAAQL PASSQGRQEA 
       190        200        210        220        230        240 
ESQPCSSAAP REVGGGHGCT VLFPQEVKSE MAEHSDRSPQ EVSSTKAFAA IGEQNKKGPL 
   
IQKRKKT



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Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...KRKKT 247 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...KRKKT 247 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt75382

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)