TopFIND 4.0

Q4QQU6: Survival of motor neuron-related-splicing factor 30

General Information

Protein names
- Survival of motor neuron-related-splicing factor 30
- Survival motor neuron domain-containing protein 1
Gene names Smndc1
Organism Rattus norvegicus
Protease Family
Protease ID
Chromosome location
UniProt ID Q4QQU6

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLTS 
        70         80         90        100        110        120 
SDSFASTQPT HSWKVGDKCM AVWSEDGQCY EAEIEEIDEE NGTAAITFAV YGNAEVTPLL 
       130        140        150        160        170        180 
NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKALKK AQRIKELEQE REDQKVKWQQ 
       190        200        210        220        230    
FNNRAYSKNK KGQVKRSIFA SPESVTGKVG VGTCGIADKP MTQYQDTSKY NVRHLMPQ

Isoforms

- Isoform 2 of Survival of motor neuron-related-splicing factor 30

Sequence View

        10         20         30         40         50         60 
MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLTS 
        70         80         90        100        110        120 
SDSFASTQPT HSWKVGDKCM AVWSEDGQCY EAEIEEIDEE NGTAAITFAV YGNAEVTPLL 
       130        140        150        160        170        180 
NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKALKK AQRIKELEQE REDQKVKWQQ 
       190        200        210        220        230    
FNNRAYSKNK KGQVKRSIFA SPESVTGKVG VGTCGIADKP MTQYQDTSKY NVRHLMPQ



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Protease Assignment Confidence:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q4QQU6-1-unknown MSEDLA... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q4QQU6-1-unknown MSEDLA... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt193534

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...HLMPQ 238 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)