TopFIND 4.0

Q56XG6: DEAD-box ATP-dependent RNA helicase 15

General Information

Protein names
- DEAD-box ATP-dependent RNA helicase 15
- 3.6.4.13
- UAP56 homolog A
Gene names RH15
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q56XG6

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MGDARDNEAY EEELLDYEEE DEKVPDSGNK VNGEAVKKGY VGIHSSGFRD FLLKPELLRA 
        70         80         90        100        110        120 
IVDSGFEHPS EVQHECIPQA ILGMDVICQA KSGMGKTAVF VLSTLQQIEP SPGQVSALVL 
       130        140        150        160        170        180 
CHTRELAYQI CNEFVRFSTY LPDTKVSVFY GGVNIKIHKD LLKNECPHIV VGTPGRVLAL 
       190        200        210        220        230        240 
AREKDLSLKN VRHFILDECD KMLESLDMRR DVQEIFKMTP HDKQVMMFSA TLSKEIRPVC 
       250        260        270        280        290        300 
KKFMQDPMEI YVDDEAKLTL HGLVQHYIKL SEMEKNRKLN DLLDALDFNQ VVIFVKSVSR 
       310        320        330        340        350        360 
AAELNKLLVE CNFPSICIHS GMSQEERLTR YKSFKEGHKR ILVATDLVGR GIDIERVNIV 
       370        380        390        400        410        420 
INYDMPDSAD TYLHRVGRAG RFGTKGLAIT FVASASDSEV LNQVQERFEV DIKELPEQID 
   
TSTYMPS

Isoforms

- Isoform 2 of DEAD-box ATP-dependent RNA helicase 15 - Isoform 3 of DEAD-box ATP-dependent RNA helicase 15

Sequence View

        10         20         30         40         50         60 
MGDARDNEAY EEELLDYEEE DEKVPDSGNK VNGEAVKKGY VGIHSSGFRD FLLKPELLRA 
        70         80         90        100        110        120 
IVDSGFEHPS EVQHECIPQA ILGMDVICQA KSGMGKTAVF VLSTLQQIEP SPGQVSALVL 
       130        140        150        160        170        180 
CHTRELAYQI CNEFVRFSTY LPDTKVSVFY GGVNIKIHKD LLKNECPHIV VGTPGRVLAL 
       190        200        210        220        230        240 
AREKDLSLKN VRHFILDECD KMLESLDMRR DVQEIFKMTP HDKQVMMFSA TLSKEIRPVC 
       250        260        270        280        290        300 
KKFMQDPMEI YVDDEAKLTL HGLVQHYIKL SEMEKNRKLN DLLDALDFNQ VVIFVKSVSR 
       310        320        330        340        350        360 
AAELNKLLVE CNFPSICIHS GMSQEERLTR YKSFKEGHKR ILVATDLVGR GIDIERVNIV 
       370        380        390        400        410        420 
INYDMPDSAD TYLHRVGRAG RFGTKGLAIT FVASASDSEV LNQVQERFEV DIKELPEQID 
   
TSTYMPS         10         20         30         40         50         60 
MGDARDNEAY EEELLDYEEE DEKVPDSGNK VNGEAVKKGY VGIHSSGFRD FLLKPELLRA 
        70         80         90        100        110        120 
IVDSGFEHPS EVQHECIPQA ILGMDVICQA KSGMGKTAVF VLSTLQQIEP SPGQVSALVL 
       130        140        150        160        170        180 
CHTRELAYQI CNEFVRFSTY LPDTKVSVFY GGVNIKIHKD LLKNECPHIV VGTPGRVLAL 
       190        200        210        220        230        240 
AREKDLSLKN VRHFILDECD KMLESLDMRR DVQEIFKMTP HDKQVMMFSA TLSKEIRPVC 
       250        260        270        280        290        300 
KKFMQDPMEI YVDDEAKLTL HGLVQHYIKL SEMEKNRKLN DLLDALDFNQ VVIFVKSVSR 
       310        320        330        340        350        360 
AAELNKLLVE CNFPSICIHS GMSQEERLTR YKSFKEGHKR ILVATDLVGR GIDIERVNIV 
       370        380        390        400        410        420 
INYDMPDSAD TYLHRVGRAG RFGTKGLAIT FVASASDSEV LNQVQERFEV DIKELPEQID 
   
TSTYMPS



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(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


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Biological System:


Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q56XG6-1-unknown MGDARD... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q56XG6-84-unknown MDVICQ... 84 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt87541

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...TYMPS 427 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...TYMPS 427 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt83158

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)