TopFIND 4.0

Q5D869: DNA-directed RNA polymerase V subunit 1

General Information

Protein names
- DNA-directed RNA polymerase V subunit 1
- DNA-directed RNA polymerase D subunit 1b
- AtNRPD1b
- Nuclear RNA polymerase D 1b
- DNA-directed RNA polymerase E subunit 1
- Nuclear RNA polymerase E 1
- 2.7.7.6
- Protein DEFECTIVE IN MERISTEM SILENCING 5
- Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3
- Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1
- RNA polymerase IV subunit 1
- POL IV 1
Gene names NRPE1
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q5D869

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MEEESTSEIL DGEIVGITFA LASHHEICIQ SISESAINHP SQLTNAFLGL PLEFGKCESC 
        70         80         90        100        110        120 
GATEPDKCEG HFGYIQLPVP IYHPAHVNEL KQMLSLLCLK CLKIKKAKGT SGGLADRLLG 
       130        140        150        160        170        180 
VCCEEASQIS IKDRASDGAS YLELKLPSRS RLQPGCWNFL ERYGYRYGSD YTRPLLAREV 
       190        200        210        220        230        240 
KEILRRIPEE SRKKLTAKGH IPQEGYILEY LPVPPNCLSV PEASDGFSTM SVDPSRIELK 
       250        260        270        280        290        300 
DVLKKVIAIK SSRSGETNFE SHKAEASEMF RVVDTYLQVR GTAKAARNID MRYGVSKISD 
       310        320        330        340        350        360 
SSSSKAWTEK MRTLFIRKGS GFSSRSVITG DAYRHVNEVG IPIEIAQRIT FEERVSVHNR 
       370        380        390        400        410        420 
GYLQKLVDDK LCLSYTQGST TYSLRDGSKG HTELKPGQVV HRRVMDGDVV FINRPPTTHK 
       430        440        450        460        470        480 
HSLQALRVYV HEDNTVKINP LMCSPLSADF DGDCVHLFYP QSLSAKAEVM ELFSVEKQLL 
       490        500        510        520        530        540 
SSHTGQLILQ MGSDSLLSLR VMLERVFLDK ATAQQLAMYG SLSLPPPALR KSSKSGPAWT 
       550        560        570        580        590        600 
VFQILQLAFP ERLSCKGDRF LVDGSDLLKF DFGVDAMGSI INEIVTSIFL EKGPKETLGF 
       610        620        630        640        650        660 
FDSLQPLLME SLFAEGFSLS LEDLSMSRAD MDVIHNLIIR EISPMVSRLR LSYRDELQLE 
       670        680        690        700        710        720 
NSIHKVKEVA ANFMLKSYSI RNLIDIKSNS AITKLVQQTG FLGLQLSDKK KFYTKTLVED 
       730        740        750        760        770        780 
MAIFCKRKYG RISSSGDFGI VKGCFFHGLD PYEEMAHSIA AREVIVRSSR GLAEPGTLFK 
       790        800        810        820        830        840 
NLMAVLRDIV ITNDGTVRNT CSNSVIQFKY GVDSERGHQG LFEAGEPVGV LAATAMSNPA 
       850        860        870        880        890        900 
YKAVLDSSPN SNSSWELMKE VLLCKVNFQN TTNDRRVILY LNECHCGKRF CQENAACTVR 
       910        920        930        940        950        960 
NKLNKVSLKD TAVEFLVEYR KQPTISEIFG IDSCLHGHIH LNKTLLQDWN ISMQDIHQKC 
       970        980        990       1000       1010       1020 
EDVINSLGQK KKKKATDDFK RTSLSVSECC SFRDPCGSKG SDMPCLTFSY NATDPDLERT 
      1030       1040       1050       1060       1070       1080 
LDVLCNTVYP VLLEIVIKGD SRICSANIIW NSSDMTTWIR NRHASRRGEW VLDVTVEKSA 
      1090       1100       1110       1120       1130       1140 
VKQSGDAWRV VIDSCLSVLH LIDTKRSIPY SVKQVQELLG LSCAFEQAVQ RLSASVRMVS 
      1150       1160       1170       1180       1190       1200 
KGVLKEHIIL LANNMTCSGT MLGFNSGGYK ALTRSLNIKA PFTEATLIAP RKCFEKAAEK 
      1210       1220       1230       1240       1250       1260 
CHTDSLSTVV GSCSWGKRVD VGTGSQFELL WNQKETGLDD KEETDVYSFL QMVISTTNAD 
      1270       1280       1290       1300       1310       1320 
AFVSSPGFDV TEEEMAEWAE SPERDSALGE PKFEDSADFQ NLHDEGKPSG ANWEKSSSWD 
      1330       1340       1350       1360       1370       1380 
NGCSGGSEWG VSKSTGGEAN PESNWEKTTN VEKEDAWSSW NTRKDAQESS KSDSGGAWGI 
      1390       1400       1410       1420       1430       1440 
KTKDADADTT PNWETSPAPK DSIVPENNEP TSDVWGHKSV SDKSWDKKNW GTESAPAAWG 
      1450       1460       1470       1480       1490       1500 
STDAAVWGSS DKKNSETESD AAAWGSRDKN NSDVGSGAGV LGPWNKKSSE TESNGATWGS 
      1510       1520       1530       1540       1550       1560 
SDKTKSGAAA WNSWDKKNIE TDSEPAAWGS QGKKNSETES GPAAWGAWDK KKSETEPGPA 
      1570       1580       1590       1600       1610       1620 
GWGMGDKKNS ETELGPAAMG NWDKKKSDTK SGPAAWGSTD AAAWGSSDKN NSETESDAAA 
      1630       1640       1650       1660       1670       1680 
WGSRNKKTSE IESGAGAWGS WGQPSPTAED KDTNEDDRNP WVSLKETKSR EKDDKERSQW 
      1690       1700       1710       1720       1730       1740 
GNPAKKFPSS GGWSNGGGAD WKGNRNHTPR PPRSEDNLAP MFTATRQRLD SFTSEEQELL 
      1750       1760       1770       1780       1790       1800 
SDVEPVMRTL RKIMHPSAYP DGDPISDDDK TFVLEKILNF HPQKETKLGS GVDFITVDKH 
      1810       1820       1830       1840       1850       1860 
TIFSDSRCFF VVSTDGAKQD FSYRKSLNNY LMKKYPDRAE EFIDKYFTKP RPSGNRDRNN 
      1870       1880       1890       1900       1910       1920 
QDATPPGEEQ SQPPNQSIGN GGDDFQTQTQ SQSPSQTRAQ SPSQAQAQSP SQTQSQSQSQ 
      1930       1940       1950       1960       1970    
SQSQSQSQSQ SQSQSQSQSQ SQSQSQSPSQ TQTQSPSQTQ AQAQSPSSQS PSQTQT

Isoforms



Sequence View



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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q5D869-1-unknown MEEEST... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...SQTQT 1976 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)