TopFIND 4.0

Q5I0E6: RNA polymerase II subunit B1 CTD phosphatase Rpap2

General Information

Protein names
- RNA polymerase II subunit B1 CTD phosphatase Rpap2
- 3.1.3.16
- Putative RNA polymerase II-associated protein 2
Gene names Rpap2
Organism Rattus norvegicus
Protease Family
Protease ID
Chromosome location
UniProt ID Q5I0E6

3

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MADSAVPYSL GPSARASSTH RVATGTKQTS ALKRRDASKR QAELEAALQR KVESERRAVR 
        70         80         90        100        110        120 
LVEQLLEENI TEEFLKECGM FITPAHYSDV VDERAIIKLC GYPLCQKKLG VIPKQKYRIS 
       130        140        150        160        170        180 
TKTNKVYDIT ERKSFCSNFC YKASKFFEAQ IPKTPVWVRE EERPPEFQLL KKGQSGCSGE 
       190        200        210        220        230        240 
VVQFFRDAVT AADVDAYGAF DAQCEPASSS TWSERASDER ASDEEGPGFV SSLLPGNRPK 
       250        260        270        280        290        300 
AVGTKPQPHR QSSTVKKKAA QKMTSKHGEQ TVSEVTEQLS NCRLDSQEKV ATCKLPAKKE 
       310        320        330        340        350        360 
NTQISSPGPL CDRLNTSTVS ENKHSVSQVT LVGISKKSAE HFRSKFAKSN PGSGSASGLV 
       370        380        390        400        410        420 
QVRPEVAKAN LLRVLKDTLT EWKTDETLKF LYGQDHGSVC LQPSAASGPD EELDEDDISC 
       430        440        450        460        470        480 
QAQNTLDETL PFRGSDTAIK PLPSYESLKK ETEMLNLRVR EFYRGRCVLN EDSTKSQDSK 
       490        500        510        520        530        540 
ENELQRDPSF PLIDSSSQNQ IRRRIVLEKL SKVLPGLLGP LQITMGDIYT ELKNLVQTFR 
       550        560        570        580        590        600 
LSNRNIIHKP VEWTLIAVVL LSLLTPILGI QKHSPKNVVF TQFIATLLTE LHLKCEDLEN 
   
LAMIFRTSC

Isoforms

- Isoform 2 of RNA polymerase II subunit B1 CTD phosphatase Rpap2

Sequence View

        10         20         30         40         50         60 
MADSAVPYSL GPSARASSTH RVATGTKQTS ALKRRDASKR QAELEAALQR KVESERRAVR 
        70         80         90        100        110        120 
LVEQLLEENI TEEFLKECGM FITPAHYSDV VDERAIIKLC GYPLCQKKLG VIPKQKYRIS 
       130        140        150        160        170        180 
TKTNKVYDIT ERKSFCSNFC YKASKFFEAQ IPKTPVWVRE EERPPEFQLL KKGQSGCSGE 
       190        200        210        220        230        240 
VVQFFRDAVT AADVDAYGAF DAQCEPASSS TWSERASDER ASDEEGPGFV SSLLPGNRPK 
       250        260        270        280        290        300 
AVGTKPQPHR QSSTVKKKAA QKMTSKHGEQ TVSEVTEQLS NCRLDSQEKV ATCKLPAKKE 
       310        320        330        340        350        360 
NTQISSPGPL CDRLNTSTVS ENKHSVSQVT LVGISKKSAE HFRSKFAKSN PGSGSASGLV 
       370        380        390        400        410        420 
QVRPEVAKAN LLRVLKDTLT EWKTDETLKF LYGQDHGSVC LQPSAASGPD EELDEDDISC 
       430        440        450        460        470        480 
QAQNTLDETL PFRGSDTAIK PLPSYESLKK ETEMLNLRVR EFYRGRCVLN EDSTKSQDSK 
       490        500        510        520        530        540 
ENELQRDPSF PLIDSSSQNQ IRRRIVLEKL SKVLPGLLGP LQITMGDIYT ELKNLVQTFR 
       550        560        570        580        590        600 
LSNRNIIHKP VEWTLIAVVL LSLLTPILGI QKHSPKNVVF TQFIATLLTE LHLKCEDLEN 
   
LAMIFRTSC



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Evidence Codes:


Methodology:


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Biological System:


Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

3 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q5I0E6-2-unknown MADSAV... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q5I0E6-1-unknown MADSAV... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt193411
    Q5I0E6-2-Acetylation ADSAVP... 2 acetylation- inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q5I0E6-2-Acetylation ADSAVP... 2 acetylation- inferred from isoform by sequence similarity unknown TopFIND inferred from TNt194357

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...FRTSC 609 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...FRTSC 609 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt153357

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)