TopFIND 4.0

Q5YD48: APOBEC1 complementation factor

General Information

Protein names
- APOBEC1 complementation factor
- APOBEC1-stimulating protein
Gene names A1cf
Organism Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID Q5YD48

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MESNHKSGDG LSGTQKEAAL RALVQRTGYS LVQENGQRKY GGPPPGWDST PPERGCEIFI 
        70         80         90        100        110        120 
GKLPRDLFED ELIPLCEKIG KIYEMRLMMD FNGNNRGYAF VTFSNKQEAK NAIKQLNNYE 
       130        140        150        160        170        180 
IRTGRLLGVC ASVDNCRLFV GGIPKTKKRE EILSEMKKVT EGVVDVIVYP SAADKTKNRG 
       190        200        210        220        230        240 
FAFVEYESHR AAAMARRRLL PGRIQLWGHP IAVDWAEPEV EVDEDTMSSV KILYVRNLML 
       250        260        270        280        290        300 
STSEEMIEKE FNSIKPGAVE RVKKIRDYAF VHFSNREDAV EAMKALNGKV LDGSPIEVTL 
       310        320        330        340        350        360 
AKPVDKDSYV RYTRGTGGRN TMLQGEYTYP LSHVYDPTTT YLGAPVFYTP QAYAAIPSLH 
       370        380        390        400        410        420 
FPATKGHLSN RALIRTPSVR EIYMNVPVGA AGVRGLGGRG YLAYTGLGRG YHVKGDKRED 
       430        440        450        460        470        480 
KLYDLLPGME LTPMNTVSLK PQGIKLAPQI LEEICQKNNW GQPVYQLHSA IGQDQRQLFL 
       490        500        510        520        530        540 
YKVTIPALAS QNPAIHPFIP PKLSAYVDEA KRYAAEHTLQ TLGIPTEGGD AGTTAPTATS 
       550        560        570        580        590    
ATVFPGYAVP SATAPVSTAQ LKQAVTLGQD LAAYTTYEVY PTFALTTRGD AYGTF

Isoforms

- Isoform 2 of APOBEC1 complementation factor - Isoform 3 of APOBEC1 complementation factor

Sequence View

        10         20         30         40         50         60 
MESNHKSGDG LSGTQKEAAL RALVQRTGYS LVQENGQRKY GGPPPGWDST PPERGCEIFI 
        70         80         90        100        110        120 
GKLPRDLFED ELIPLCEKIG KIYEMRLMMD FNGNNRGYAF VTFSNKQEAK NAIKQLNNYE 
       130        140        150        160        170        180 
IRTGRLLGVC ASVDNCRLFV GGIPKTKKRE EILSEMKKVT EGVVDVIVYP SAADKTKNRG 
       190        200        210        220        230        240 
FAFVEYESHR AAAMARRRLL PGRIQLWGHP IAVDWAEPEV EVDEDTMSSV KILYVRNLML 
       250        260        270        280        290        300 
STSEEMIEKE FNSIKPGAVE RVKKIRDYAF VHFSNREDAV EAMKALNGKV LDGSPIEVTL 
       310        320        330        340        350        360 
AKPVDKDSYV RYTRGTGGRN TMLQGEYTYP LSHVYDPTTT YLGAPVFYTP QAYAAIPSLH 
       370        380        390        400        410        420 
FPATKGHLSN RALIRTPSVR EIYMNVPVGA AGVRGLGGRG YLAYTGLGRG YHVKGDKRED 
       430        440        450        460        470        480 
KLYDLLPGME LTPMNTVSLK PQGIKLAPQI LEEICQKNNW GQPVYQLHSA IGQDQRQLFL 
       490        500        510        520        530        540 
YKVTIPALAS QNPAIHPFIP PKLSAYVDEA KRYAAEHTLQ TLGIPTEGGD AGTTAPTATS 
       550        560        570        580        590    
ATVFPGYAVP SATAPVSTAQ LKQAVTLGQD LAAYTTYEVY PTFALTTRGD AYGTF         10         20         30         40         50         60 
MESNHKSGDG LSGTQKEAAL RALVQRTGYS LVQENGQRKY GGPPPGWDST PPERGCEIFI 
        70         80         90        100        110        120 
GKLPRDLFED ELIPLCEKIG KIYEMRLMMD FNGNNRGYAF VTFSNKQEAK NAIKQLNNYE 
       130        140        150        160        170        180 
IRTGRLLGVC ASVDNCRLFV GGIPKTKKRE EILSEMKKVT EGVVDVIVYP SAADKTKNRG 
       190        200        210        220        230        240 
FAFVEYESHR AAAMARRRLL PGRIQLWGHP IAVDWAEPEV EVDEDTMSSV KILYVRNLML 
       250        260        270        280        290        300 
STSEEMIEKE FNSIKPGAVE RVKKIRDYAF VHFSNREDAV EAMKALNGKV LDGSPIEVTL 
       310        320        330        340        350        360 
AKPVDKDSYV RYTRGTGGRN TMLQGEYTYP LSHVYDPTTT YLGAPVFYTP QAYAAIPSLH 
       370        380        390        400        410        420 
FPATKGHLSN RALIRTPSVR EIYMNVPVGA AGVRGLGGRG YLAYTGLGRG YHVKGDKRED 
       430        440        450        460        470        480 
KLYDLLPGME LTPMNTVSLK PQGIKLAPQI LEEICQKNNW GQPVYQLHSA IGQDQRQLFL 
       490        500        510        520        530        540 
YKVTIPALAS QNPAIHPFIP PKLSAYVDEA KRYAAEHTLQ TLGIPTEGGD AGTTAPTATS 
       550        560        570        580        590    
ATVFPGYAVP SATAPVSTAQ LKQAVTLGQD LAAYTTYEVY PTFALTTRGD AYGTF



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Evidence Codes:


Methodology:


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Biological System:


Protease Assignment Confidence:


Evidence Names:


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Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q5YD48-1-unknown MESNHK... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q5YD48-1-unknown MESNHK... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt65858
    Q5YD48-1-unknown MESNHK... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt65859

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...AYGTF 595 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...AYGTF 595 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt61476

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)