TopFIND 4.0

Q61473: Transcription factor SOX-17

General Information

Protein names
- Transcription factor SOX-17
Gene names Sox17
Organism Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID Q61473

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSSPDAGYAS DDQSQPRSAQ PAVMAGLGPC PWAESLSPLG DVKVKGEVVA SSGAPAGTSG 
        70         80         90        100        110        120 
RAKAESRIRR PMNAFMVWAK DERKRLAQQN PDLHNAELSK MLGKSWKALT LAEKRPFVEE 
       130        140        150        160        170        180 
AERLRVQHMQ DHPNYKYRPR RRKQVKRMKR VEGGFLHALV EPQAGALGPE GGRVAMDGLG 
       190        200        210        220        230        240 
LPFPEPGYPA GPPLMSPHMG PHYRDCQGLG APALDGYPLP TPDTSPLDGV EQDPAFFAAP 
       250        260        270        280        290        300 
LPGDCPAAGT YTYAPVSDYA VSVEPPAGPM RVGPDPSGPA MPGILAPPSA LHLYYGAMGS 
       310        320        330        340        350        360 
PAASAGRGFH AQPQQPLQPQ APPPPPQQQH PAHGPGQPSP PPEALPCRDG TESNQPTELL 
       370        380        390        400        410    
GEVDRTEFEQ YLPFVYKPEM GLPYQGHDCG VNLSDSHGAI SSVVSDASSA VYYCNYPDI

Isoforms

- Isoform 2 of Transcription factor SOX-17

Sequence View

        10         20         30         40         50         60 
MSSPDAGYAS DDQSQPRSAQ PAVMAGLGPC PWAESLSPLG DVKVKGEVVA SSGAPAGTSG 
        70         80         90        100        110        120 
RAKAESRIRR PMNAFMVWAK DERKRLAQQN PDLHNAELSK MLGKSWKALT LAEKRPFVEE 
       130        140        150        160        170        180 
AERLRVQHMQ DHPNYKYRPR RRKQVKRMKR VEGGFLHALV EPQAGALGPE GGRVAMDGLG 
       190        200        210        220        230        240 
LPFPEPGYPA GPPLMSPHMG PHYRDCQGLG APALDGYPLP TPDTSPLDGV EQDPAFFAAP 
       250        260        270        280        290        300 
LPGDCPAAGT YTYAPVSDYA VSVEPPAGPM RVGPDPSGPA MPGILAPPSA LHLYYGAMGS 
       310        320        330        340        350        360 
PAASAGRGFH AQPQQPLQPQ APPPPPQQQH PAHGPGQPSP PPEALPCRDG TESNQPTELL 
       370        380        390        400        410    
GEVDRTEFEQ YLPFVYKPEM GLPYQGHDCG VNLSDSHGAI SSVVSDASSA VYYCNYPDI



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Physiological Relevance:


Evidence Codes:


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Biological System:


Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q61473-1-unknown MSSPDA... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q61473-129-unknown MQDHPN... 129 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt90278

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...NYPDI 419 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...NYPDI 419 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt85896

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)