TopFIND 4.0

Q66GR6: Single-stranded DNA-binding protein WHY3, chloroplastic

General Information

Protein names
- Single-stranded DNA-binding protein WHY3, chloroplastic
- Protein PLASTID TRANSCRIPTIONALLY ACTIVE 11
- Protein WHIRLY 3
- AtWHY3
Gene names WHY3
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q66GR6

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSQLLSSPPM AVFSKTFINH KFSDARFLSS HSILTSGGFA GKIIPLKPTA RLKLTVKSRQ 
        70         80         90        100        110        120 
SDYFEKQRFG DSSSSQNAEV SSPRFYVGHS IYKGKAALTI EPRAPEFVAL ESGAFKLTKE 
       130        140        150        160        170        180 
GFLLLQFAPA AGVRQYDWSR KQVFSLSVTE IGNLVSLGPR ESCEFFHDPF KGKGSDEGKV 
       190        200        210        220        230        240 
RKVLKVEPLP DGSGRFFNLS VQNKLLNVDE SVYIPITKAE FAVLISAFNF VLPHLIGWSA 
       250        260    
FANSIKPEDS NRLNNASPKY GGDYEWSR

Isoforms

- Isoform 2 of Single-stranded DNA-binding protein WHY3, chloroplastic

Sequence View

        10         20         30         40         50         60 
MSQLLSSPPM AVFSKTFINH KFSDARFLSS HSILTSGGFA GKIIPLKPTA RLKLTVKSRQ 
        70         80         90        100        110        120 
SDYFEKQRFG DSSSSQNAEV SSPRFYVGHS IYKGKAALTI EPRAPEFVAL ESGAFKLTKE 
       130        140        150        160        170        180 
GFLLLQFAPA AGVRQYDWSR KQVFSLSVTE IGNLVSLGPR ESCEFFHDPF KGKGSDEGKV 
       190        200        210        220        230        240 
RKVLKVEPLP DGSGRFFNLS VQNKLLNVDE SVYIPITKAE FAVLISAFNF VLPHLIGWSA 
       250        260    
FANSIKPEDS NRLNNASPKY GGDYEWSR



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q66GR6-1-unknown MSQLLS... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt94549
    Q66GR6-76-unknown QNAEVS... 76 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q66GR6-76-unknown QNAEVS... 76 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt115793

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...YEWSR 268 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...YEWSR 268 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt90167

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)