TopFIND 4.0

Q6AXY7: Pre-mRNA-splicing factor 38B

General Information

Protein names
- Pre-mRNA-splicing factor 38B
Gene names Prpf38b
Organism Rattus norvegicus
Protease Family
Protease ID
Chromosome location
UniProt ID Q6AXY7

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MANNSPALTG NSQPQHQAAA AVVQQQQQCG GGGATKPAVS GKQGNVLPLW GNEKTMNLNP 
        70         80         90        100        110        120 
MILTNILSSP YFKVQLYELK TYHEVVDEIY FKVTHVEPWE KGSRKTAGQT GMCGGVRGVG 
       130        140        150        160        170        180 
TGGIVSTAFC LLYKLFTLKL TRKQVMGLIT HTDSPYIRAL GFMYIRYTQP PTDLWDWFES 
       190        200        210        220        230        240 
FLDDEEDLDV KAGGGCVMTI GEMLRSFLTK LEWFSTLFPR IPVPVQKNID QQIKTRPRKI 
       250        260        270        280        290        300 
KKDGKEGVEE IDRHIERRRS RSPRRSLSPR RSPRRSRSRS HHRDGHGSSS FDRELEREKE 
       310        320        330        340        350        360 
RQRLEREAKE REKERRRSRS LDRGLDRRRS RSRERHRSRS RSRDRKGDRR DRDREREKEN 
       370        380        390        400        410        420 
ERGRRRDRDY DKDRGNDRER DRERSRERSK EQRSRGEGEE KKHKEDKEDR RHRDDKKESK 
       430        440        450        460        470        480 
KKHSRSRSRE RKHRSRSRSR NAGKRSRSRS KDKASKHKNE SKEKSNKRSR SGSQGRTGSV 
       490        500        510        520        530        540 
EKRKREHSPS REKSRKRSRS QDRSHKRDHD SKDQSDRQDH QRSQSVEPES QEKEHKNKDE 
   
TV

Isoforms



Sequence View



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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q6AXY7-2-unknown MANNSP... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q6AXY7-2-Acetylation ANNSPA... 2 acetylation- inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...KDETV 542 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)