Q6PDG5: SWI/SNF complex subunit SMARCC2
Protein names | - SWI/SNF complex subunit SMARCC2 - BRG1-associated factor 170 - BAF170 - SWI/SNF complex 170 kDa subunit - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2 |
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Gene names | Smarcc2 |
Organism | Mus musculus |
Protease Family | |
Protease ID | |
Chromosome location | |
UniProt ID | Q6PDG5 |
2
N-termini
2
C-termini
1
Cleavages
0
Substrates
Sequence
10 20 30 40 50 60
MAVRKKDGGP NVKYYEAADT VTQFDNVRLW LGKNYKKYIQ AEPPTNKSLS SLVVQLLQFQ
70 80 90 100 110 120
EEVFGKHVSN APLTKLPIKC FLDFKAGGSL CHILAAAYKF KSDQGWRRYD FQNPSRMDRN
130 140 150 160 170 180
VEMFMTIEKS LVQNNCLSRP NIFLCPEIEP KLLGKLKDIV KRHQGTISED KSNASHVVYP
190 200 210 220 230 240
VPGNLEEEEW VRPVMKRDKQ VLLHWGYYPD SYDTWIPASE IEASVEDAPT PEKPRKVHAK
250 260 270 280 290 300
WILDTDTFNE WMNEEDYEVS DDKSPVSRRK KISAKTLTDE VNSPDSDRRD KKGGNYKKRK
310 320 330 340 350 360
RSPSPSPTPE AKKKNAKKGP STPYTKSKRG HREEEQEDLT KDMDEPSPVP NVEEVTLPKT
370 380 390 400 410 420
VNTKKDSESA PVKGGTMTDL DEQDDESMET TGKDEDENST GNKGEQTKNP DLHEDNVTEQ
430 440 450 460 470 480
THHIIIPSYA AWFDYNSVHA IERRALPEFF NGKNKSKTPE IYLAYRNFMI DTYRLNPQEY
490 500 510 520 530 540
LTSTACRRNL AGDVCAIMRV HAFLEQWGLI NYQVDAESRP TPMGPPPTSH FHVLADTPSG
550 560 570 580 590 600
LVPLQPKPPQ QSSASQQMLN FPEKGKEKPA DMQNFGLRTD MYTKKNVPSK SKAAASATRE
610 620 630 640 650 660
WTEQETLLLL EALEMYKDDW NKVSEHVGSR TQDECILHFL RLPIEDPYLE DSEASLGPLA
670 680 690 700 710 720
YQPIPFSQSG NPVMSTVAFL ASVVDPRVAS AAAKSALEEF SKMKEEVPTA LVEAHVRKVE
730 740 750 760 770 780
EAAKVTGKAD PAFGLESSGI AGTASDEPER IEESGTEEAR PEGQAADEKK EPKEPREGGG
790 800 810 820 830 840
AVEEEAKEEI SEVPKKDEEK GKEGDSEKES EKSDGDPIVD PEKDKEPTEG QEEVLKEVAE
850 860 870 880 890 900
PEGERKTKVE RDIGEGNLST AAAAALAAAA VKAKHLAAVE ERKIKSLVAL LVETQMKKLE
910 920 930 940 950 960
IKLRHFEELE TIMDREREAL EYQRQQLLAD RQAFHMEQLK YAEMRARQQH FQQMHQQQQQ
970 980 990 1000 1010 1020
QPPTLPPGSQ PIPPTGAAGP PTVHGLAVPP AAVASAPPGS GAPPGSLGPS EQIGQAGTTA
1030 1040 1050 1060 1070 1080
GPQQPQQAGA PQPGAVPPGV PPPGPHGPSP FPNQPTPPSM MPGAVPGSGH PGVAGNAPLG
1090 1100 1110 1120 1130 1140
LPFGMPPPPP AAPSVIPFGS LADSISINLP PPPNLHGHHH HLPFAPGTIP PPNLPVSMAN
1150 1160 1170 1180 1190 1200
PLHPNLPATT TMPSSLPLGP GLGSAAAQSP AIVAAVQGNL LPSASPLPDP GTPLPPDPTA
1210
PSPGTVTPVP PPQ
Isoforms
- Isoform 2 of SWI/SNF complex subunit SMARCC2Sequence View
10 20 30 40 50 60
MAVRKKDGGP NVKYYEAADT VTQFDNVRLW LGKNYKKYIQ AEPPTNKSLS SLVVQLLQFQ
70 80 90 100 110 120
EEVFGKHVSN APLTKLPIKC FLDFKAGGSL CHILAAAYKF KSDQGWRRYD FQNPSRMDRN
130 140 150 160 170 180
VEMFMTIEKS LVQNNCLSRP NIFLCPEIEP KLLGKLKDIV KRHQGTISED KSNASHVVYP
190 200 210 220 230 240
VPGNLEEEEW VRPVMKRDKQ VLLHWGYYPD SYDTWIPASE IEASVEDAPT PEKPRKVHAK
250 260 270 280 290 300
WILDTDTFNE WMNEEDYEVS DDKSPVSRRK KISAKTLTDE VNSPDSDRRD KKGGNYKKRK
310 320 330 340 350 360
RSPSPSPTPE AKKKNAKKGP STPYTKSKRG HREEEQEDLT KDMDEPSPVP NVEEVTLPKT
370 380 390 400 410 420
VNTKKDSESA PVKGGTMTDL DEQDDESMET TGKDEDENST GNKGEQTKNP DLHEDNVTEQ
430 440 450 460 470 480
THHIIIPSYA AWFDYNSVHA IERRALPEFF NGKNKSKTPE IYLAYRNFMI DTYRLNPQEY
490 500 510 520 530 540
LTSTACRRNL AGDVCAIMRV HAFLEQWGLI NYQVDAESRP TPMGPPPTSH FHVLADTPSG
550 560 570 580 590 600
LVPLQPKPPQ QSSASQQMLN FPEKGKEKPA DMQNFGLRTD MYTKKNVPSK SKAAASATRE
610 620 630 640 650 660
WTEQETLLLL EALEMYKDDW NKVSEHVGSR TQDECILHFL RLPIEDPYLE DSEASLGPLA
670 680 690 700 710 720
YQPIPFSQSG NPVMSTVAFL ASVVDPRVAS AAAKSALEEF SKMKEEVPTA LVEAHVRKVE
730 740 750 760 770 780
EAAKVTGKAD PAFGLESSGI AGTASDEPER IEESGTEEAR PEGQAADEKK EPKEPREGGG
790 800 810 820 830 840
AVEEEAKEEI SEVPKKDEEK GKEGDSEKES EKSDGDPIVD PEKDKEPTEG QEEVLKEVAE
850 860 870 880 890 900
PEGERKTKVE RDIGEGNLST AAAAALAAAA VKAKHLAAVE ERKIKSLVAL LVETQMKKLE
910 920 930 940 950 960
IKLRHFEELE TIMDREREAL EYQRQQLLAD RQAFHMEQLK YAEMRARQQH FQQMHQQQQQ
970 980 990 1000 1010 1020
QPPTLPPGSQ PIPPTGAAGP PTVHGLAVPP AAVASAPPGS GAPPGSLGPS EQIGQAGTTA
1030 1040 1050 1060 1070 1080
GPQQPQQAGA PQPGAVPPGV PPPGPHGPSP FPNQPTPPSM MPGAVPGSGH PGVAGNAPLG
1090 1100 1110 1120 1130 1140
LPFGMPPPPP AAPSVIPFGS LADSISINLP PPPNLHGHHH HLPFAPGTIP PPNLPVSMAN
1150 1160 1170 1180 1190 1200
PLHPNLPATT TMPSSLPLGP GLGSAAAQSP AIVAAVQGNL LPSASPLPDP GTPLPPDPTA
1210
PSPGTVTPVP PPQ
Protein Neighborhood
Domains & Features
2 N-termini - 2 C-termini - 1 Cleavages - 0 Substrates
N-termini
Name | Sequence | Position | Modification | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMID) |
---|---|---|---|---|---|---|---|---|---|
Q6PDG5-1-unknown | MAVRKK... | 1 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | |||
Q6PDG5-1-unknown | MAVRKK... | 1 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt90081 | |||
Q6PDG5-582-unknown | YTKKNV... | 582 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC30621 | |||
Q6PDG5-582-unknown | YTKKNV... | 582 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt154360 |
C-termini
Name | Sequence | Position | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
...LRTDMY | 581 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC30621 | |||
...LRTDMY | 581 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt137781 | |||
...VPPPQ | 1213 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | |||
...VPPPQ | 1213 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt85699 |
Cleavages
Protease | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
CATE_MOUSE | 581 | TDMY.|.YTKK | inferred from experiment | unknown | MEROPS | Merops CATE_MOUSE -> SMRC2_MOUSE @581 |
Substrates
Substrate | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
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