TopFIND 4.0

Q6PEC3: Protein YIF1B

General Information

Protein names
- Protein YIF1B
- YIP1-interacting factor homolog B
Gene names Yif1b
Organism Rattus norvegicus
Protease Family
Protease ID
Chromosome location
UniProt ID Q6PEC3

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MHATGLAAPA GTPRLRKWPS KRRVPVSQPG MADPHQFFDD TSSAPSRGYG GQPSPGSLGY 
        70         80         90        100        110        120 
PTSSSEAAFL AAPMSNMAMA YGSSLAAQGK ELVDKNIDRF IPVSKLKYYF AVDTVYVGKK 
       130        140        150        160        170        180 
LGLLVFPYLH QDWEVQYQQD TPVAPRFDIN APDLYIPAMA FITYILVAGL ALGTQDRMIG 
       190        200        210        220        230        240 
GVLTGLLFGK IGYYLVLAWC CVSIFVFMIR TLRLKILAQA AAEGVPVRGA RNQLRMYLTM 
       250    
AVAAAQPVLM YWLTFHLVR

Isoforms

- Isoform 2 of Protein YIF1B

Sequence View

        10         20         30         40         50         60 
MHATGLAAPA GTPRLRKWPS KRRVPVSQPG MADPHQFFDD TSSAPSRGYG GQPSPGSLGY 
        70         80         90        100        110        120 
PTSSSEAAFL AAPMSNMAMA YGSSLAAQGK ELVDKNIDRF IPVSKLKYYF AVDTVYVGKK 
       130        140        150        160        170        180 
LGLLVFPYLH QDWEVQYQQD TPVAPRFDIN APDLYIPAMA FITYILVAGL ALGTQDRMIG 
       190        200        210        220        230        240 
GVLTGLLFGK IGYYLVLAWC CVSIFVFMIR TLRLKILAQA AAEGVPVRGA RNQLRMYLTM 
       250    
AVAAAQPVLM YWLTFHLVR



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(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q6PEC3-1-Acetylation MHATGL... 1 acetylation- inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...FHLVR 259 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...FHLVR 259 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt153665

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)