TopFIND 4.0

Q80ZF0: Collagen alpha-1(XXVII) chain

General Information

Protein names
- Collagen alpha-1(XXVII) chain
Gene names Col27a1
Organism Rattus norvegicus
Protease Family
Protease ID
Chromosome location
UniProt ID Q80ZF0

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MGLARATAGL GPCCPPAPAL LGAGLRWGGF LFAWILVSFS CHLASTQGAP EDVDVLQRLG 
        70         80         90        100        110        120 
LSWTKAGGGR SPAPPGVIPF PSGFIFTQRA KLQAPTTNVL PTTLGRELAL VLSLCSHRVN 
       130        140        150        160        170        180 
HAFLFAIRSR KHRLQLGLQF LPGRTLVHLG PRQSVAFDLD VHDGRWHHLA LELRGRTVTL 
       190        200        210        220        230        240 
VTACGQHRVP VPLPSRRDSM LDPQGSFLLG KMNPRAVQFE GALCQFSIHP VAQVAHNYCA 
       250        260        270        280        290        300 
HLRERCRQVD TYGPQVGALF PWDSGPAFAL HPEPALLGLG NLTRNPATLG SRPISRGLMV 
       310        320        330        340        350        360 
TMAPAVPTKP LRMVHQDVSK LGSSQTPLVP AKQSARKTPS PFPSAALANS TRVFHSAPAQ 
       370        380        390        400        410        420 
PRQITATSPT KRPPTKPSVS SLSVTPMKSP QAIQKAGTPS FSRPIPTTQK PTPLTSHPSP 
       430        440        450        460        470        480 
SKVSSATVRP VQKTFMTPQP PTLSPQALHP ITGLPKKFTI PTVAKPQSKM TSWASKPVLA 
       490        500        510        520        530        540 
RTNVPKALEQ TVVAQSSVSY LGSQTLATAL PPLGVGNSRM MPSTRDSTST PAGSKKITGL 
       550        560        570        580        590        600 
EASKKTRHKS SPRKPIPLSS GKTARDASPR DLTTKPSQLS TPALVLAPAH LLSSSPQPTS 
       610        620        630        640        650        660 
SSFSFFHLPE PTPFLMLMGP PGSKGDCGLP GPPGLPGLPG SPGPRGPRGP PGPFGNPGLP 
       670        680        690        700        710        720 
GPPGAKGQKG DPGLSPGQAH DGAKGNMGLP GLAGNPGPMG RKGHKGHPGA AGHPGEQGQP 
       730        740        750        760        770        780 
GPEGSPGAKG YPGRQGFPGP VGDPGPKGSR GYIGLPGLFG LPGSDGERGL PGIPGKRGEM 
       790        800        810        820        830        840 
GRPGFPGDFG ERGPPGLDGN PGEIGLPGPP GVLGLLGDMG ALGPVGYPGP KGMKGLMGGV 
       850        860        870        880        890        900 
GEPGLKGDKG EQGVPGVSGD PGFQGDKGSH GLPGFPGARG KPGPMGKAGD KGSLGLPGPP 
       910        920        930        940        950        960 
GPEGFPGDIG PPGDNGPEGM KGKPGARGLP GPPGQLGPEG DEGPMGPPGV PGLEGQPGRK 
       970        980        990       1000       1010       1020 
GFPGRPGLDG SKGEPGDPGR PGPVGEQGLM GFVGLVGEPG IVGEKGDRGV MGPPGAPGPK 
      1030       1040       1050       1060       1070       1080 
GSMGHPGTPG GVGDPGEPGP WGPPGSRGLP GMRGAKGHRG PRGPDGPAGE QGSKGLKGRV 
      1090       1100       1110       1120       1130       1140 
GPRGRPGQPG QQGAAGERGH SGAKGFLGIP GPSGPPGAKG LPGEPGSQGP QGPVGPPGEM 
      1150       1160       1170       1180       1190       1200 
GPKGPPGAVG EPGLPGDSGM KGDLGPLGPP GEQGLIGQRG EPGLEGDLGP VGPDGLKGDR 
      1210       1220       1230       1240       1250       1260 
GDPGPDGEHG EKGQEGLKGE EGLPGPPGIT GVRGREGKPG SQGEKGQRGA KGAKGYQGQL 
      1270       1280       1290       1300       1310       1320 
GEMGIPGDPG PPGTPGPKGS RGTLGPMGAP GRMGAQGEPG LAGYNGHKGI TGPLGPPGPK 
      1330       1340       1350       1360       1370       1380 
GEKGEQGEDG KTEGAPGPPG ERGPVGDRGD RGEPGDPGYP GQEGVQGLRG EPGQQGQPGH 
      1390       1400       1410       1420       1430       1440 
PGPRGRPGPK GSKGEEGPKG KPGKAGASGR RGTQGLQGLP GPRGVVGRQG PEGMAGQDGN 
      1450       1460       1470       1480       1490       1500 
PGRDGRPGYQ GEQGNDGDPG PVGPAGRRGN PGVAGLPGAQ GPPGFKGESG LPGQLGPPGK 
      1510       1520       1530       1540       1550       1560 
RGTEGGTGLP GNQGEPGSKG QPGDSGEMGF PGVAGLFGPK GPPGDIGFKG IQGPRGPPGL 
      1570       1580       1590       1600       1610       1620 
MGKEGIIGPP GMLGPSGLPG PKGDRGSRGD WGLQGPRGPP GPRGRPGPPG PPWHPVQFQQ 
      1630       1640       1650       1660       1670       1680 
DDLEAAFQTW MDAHGAVRLE QGYSYPDQLM LDQGGEIFKT LHYLSNLIQS IKTPLGTKEN 
      1690       1700       1710       1720       1730       1740 
PARVCRDLMD CEQKMADGIY WVDPNLGCSS DTIEVSCNFT HGGQTCLKPI TASKAEFAVS 
      1750       1760       1770       1780       1790       1800 
RVQMNFLHLL SSEGTQHITI HCLNMTVWQE GPARPSARQA VRFRAWNGQV FEAGGQFRPE 
      1810       1820       1830       1840       1850    
VSMDGCKVHD GRWHQTLFTF RTQDPQQLPI VSVDNLPPVS SGKQYRLEVG PACFL

Isoforms



Sequence View



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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q80ZF0-619-unknown GPPGSK... 619 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...PPWHPV 1615 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)