TopFIND 4.0

Q8VDW0: ATP-dependent RNA helicase DDX39A

General Information

Protein names
- ATP-dependent RNA helicase DDX39A
- 3.6.4.13
- DEAD box protein 39
Gene names Ddx39a
Organism Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID Q8VDW0

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MAEQDVENEL LDYDEDEEPQ APQESTPAPP KKDVKGSYVS IHSSGFRDFL LKPELLRAIV 
        70         80         90        100        110        120 
DCGFEHPSEV QHECIPQAIL GMDVLCQAKS GMGKTAVFVL ATLQQIEPVN GQVSVLVMCH 
       130        140        150        160        170        180 
TRELAFQISK EYERFSKYMP SVKVSVFFGG LSIKKDEDVL KKNCPHVVVG TPGRILALVR 
       190        200        210        220        230        240 
SRSLNLRNVK HFVLDECDKM LEQLDMRRDV QEIFRLTPHE KQCMMFSATL SKEIRPVCRK 
       250        260        270        280        290        300 
FMQDPMEVFV DDETKLTLHG LQQYYVKLKD SEKNRKLFDL LDVLEFNQVV IFVKSVQRCM 
       310        320        330        340        350        360 
ALAQLLVEQN FPAIAIHRGM AQEERLSRYQ QFKDFQRRIL VATNLFGRGM DIERVNIVFN 
       370        380        390        400        410        420 
YDMPEDSDTY LHRVARAGRF GTKGLAVTFV SDENDAKILN DVQDRFEVNV AELPEEIDIS 
   
TYIEQSR

Isoforms

- Isoform 2 of ATP-dependent RNA helicase DDX39A - Isoform 2 of ATP-dependent RNA helicase DDX39A

Sequence View

        10         20         30         40         50         60 
MAEQDVENEL LDYDEDEEPQ APQESTPAPP KKDVKGSYVS IHSSGFRDFL LKPELLRAIV 
        70         80         90        100        110        120 
DCGFEHPSEV QHECIPQAIL GMDVLCQAKS GMGKTAVFVL ATLQQIEPVN GQVSVLVMCH 
       130        140        150        160        170        180 
TRELAFQISK EYERFSKYMP SVKVSVFFGG LSIKKDEDVL KKNCPHVVVG TPGRILALVR 
       190        200        210        220        230        240 
SRSLNLRNVK HFVLDECDKM LEQLDMRRDV QEIFRLTPHE KQCMMFSATL SKEIRPVCRK 
       250        260        270        280        290        300 
FMQDPMEVFV DDETKLTLHG LQQYYVKLKD SEKNRKLFDL LDVLEFNQVV IFVKSVQRCM 
       310        320        330        340        350        360 
ALAQLLVEQN FPAIAIHRGM AQEERLSRYQ QFKDFQRRIL VATNLFGRGM DIERVNIVFN 
       370        380        390        400        410        420 
YDMPEDSDTY LHRVARAGRF GTKGLAVTFV SDENDAKILN DVQDRFEVNV AELPEEIDIS 
   
TYIEQSR         10         20         30         40         50         60 
MAEQDVENEL LDYDEDEEPQ APQESTPAPP KKDVKGSYVS IHSSGFRDFL LKPELLRAIV 
        70         80         90        100        110        120 
DCGFEHPSEV QHECIPQAIL GMDVLCQAKS GMGKTAVFVL ATLQQIEPVN GQVSVLVMCH 
       130        140        150        160        170        180 
TRELAFQISK EYERFSKYMP SVKVSVFFGG LSIKKDEDVL KKNCPHVVVG TPGRILALVR 
       190        200        210        220        230        240 
SRSLNLRNVK HFVLDECDKM LEQLDMRRDV QEIFRLTPHE KQCMMFSATL SKEIRPVCRK 
       250        260        270        280        290        300 
FMQDPMEVFV DDETKLTLHG LQQYYVKLKD SEKNRKLFDL LDVLEFNQVV IFVKSVQRCM 
       310        320        330        340        350        360 
ALAQLLVEQN FPAIAIHRGM AQEERLSRYQ QFKDFQRRIL VATNLFGRGM DIERVNIVFN 
       370        380        390        400        410        420 
YDMPEDSDTY LHRVARAGRF GTKGLAVTFV SDENDAKILN DVQDRFEVNV AELPEEIDIS 
   
TYIEQSR



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


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Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...IEQSR 427 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...IEQSR 427 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt68996

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)