TopFIND 4.0

Q8W4R3: DEAD-box ATP-dependent RNA helicase 30

General Information

Protein names
- DEAD-box ATP-dependent RNA helicase 30
- 3.6.4.13
Gene names RH30
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q8W4R3

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSSYDRRFAD PNSYRQRSGA PVGSSQPMDP SAAPYNPRYT GGGGGYGPSP VMAGDNSGYN 
        70         80         90        100        110        120 
RYPSFQPPSG GFSVGRGGGR GGYGQYGDRN GGGNWGGGGG RGGSSKRELD SVSLPKQNFG 
       130        140        150        160        170        180 
NLVHFEKNFY VESPTVQAMT EQDVAMYRTE RDISVEGRDV PKPMKMFQDA NFPDNILEAI 
       190        200        210        220        230        240 
AKLGFTEPTP IQAQGWPMAL KGRDLIGIAE TGSGKTLAYL LPALVHVSAQ PRLGQDDGPI 
       250        260        270        280        290        300 
VLILAPTREL AVQIQEESRK FGLRSGVRST CIYGGAPKGP QIRDLRRGVE IVIATPGRLI 
       310        320        330        340        350        360 
DMLECQHTNL KRVTYLVLDE ADRMLDMGFE PQIRKIVSQI RPDRQTLLWS ATWPREVETL 
       370        380        390        400        410        420 
ARQFLRDPYK AIIGSTDLKA NQSINQVIEI VPTPEKYNRL LTLLKQLMDG SKILIFVETK 
       430        440        450        460        470        480 
RGCDQVTRQL RMDGWPALAI HGDKTQSERD RVLAEFKSGR SPIMTATDVA ARGLDVKDIK 
       490        500        510        520        530        540 
CVVNYDFPNT LEDYIHRIGR TGRAGAKGMA FTFFTHDNAK FARELVKILQ EAGQVVPPTL 
       550        560        570        580        590    
SALVRSSGSG YGGSGGGRNF RPRGGGRGGG FGDKRSRSTS NFVPHGGKRT W

Isoforms

- Isoform 2 of DEAD-box ATP-dependent RNA helicase 30

Sequence View

        10         20         30         40         50         60 
MSSYDRRFAD PNSYRQRSGA PVGSSQPMDP SAAPYNPRYT GGGGGYGPSP VMAGDNSGYN 
        70         80         90        100        110        120 
RYPSFQPPSG GFSVGRGGGR GGYGQYGDRN GGGNWGGGGG RGGSSKRELD SVSLPKQNFG 
       130        140        150        160        170        180 
NLVHFEKNFY VESPTVQAMT EQDVAMYRTE RDISVEGRDV PKPMKMFQDA NFPDNILEAI 
       190        200        210        220        230        240 
AKLGFTEPTP IQAQGWPMAL KGRDLIGIAE TGSGKTLAYL LPALVHVSAQ PRLGQDDGPI 
       250        260        270        280        290        300 
VLILAPTREL AVQIQEESRK FGLRSGVRST CIYGGAPKGP QIRDLRRGVE IVIATPGRLI 
       310        320        330        340        350        360 
DMLECQHTNL KRVTYLVLDE ADRMLDMGFE PQIRKIVSQI RPDRQTLLWS ATWPREVETL 
       370        380        390        400        410        420 
ARQFLRDPYK AIIGSTDLKA NQSINQVIEI VPTPEKYNRL LTLLKQLMDG SKILIFVETK 
       430        440        450        460        470        480 
RGCDQVTRQL RMDGWPALAI HGDKTQSERD RVLAEFKSGR SPIMTATDVA ARGLDVKDIK 
       490        500        510        520        530        540 
CVVNYDFPNT LEDYIHRIGR TGRAGAKGMA FTFFTHDNAK FARELVKILQ EAGQVVPPTL 
       550        560        570        580        590    
SALVRSSGSG YGGSGGGRNF RPRGGGRGGG FGDKRSRSTS NFVPHGGKRT W



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


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Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q8W4R3-1-unknown MSSYDR... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q8W4R3-1-unknown MSSYDR... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt87542

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...GKRTW 591 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)