TopFIND 4.0

Q93V72: PLASMODESMATA CALLOSE-BINDING PROTEIN 4

General Information

Protein names
- PLASMODESMATA CALLOSE-BINDING PROTEIN 4
- AtPDCB4
Gene names
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q93V72

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT 
        70         80         90        100        110        120 
VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS NCLTGSSSSG TPTTGTPTTG 
       130        140        150        160        170        180 
TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF 
       190        200        210        220    
PGTTLGPTGS GGLGDPNAGE KLSVRTNTVV FLLTGVAAML VI

Isoforms

- Isoform 2 of Glucan endo-1,3-beta-glucosidase-like protein At1g69295 - Isoform 2 of PLASMODESMATA CALLOSE-BINDING PROTEIN 4

Sequence View

        10         20         30         40         50         60 
MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT 
        70         80         90        100        110        120 
VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS NCLTGSSSSG TPTTGTPTTG 
       130        140        150        160        170        180 
TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF 
       190        200        210        220    
PGTTLGPTGS GGLGDPNAGE KLSVRTNTVV FLLTGVAAML VI         10         20         30         40         50         60 
MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT 
        70         80         90        100        110        120 
VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS NCLTGSSSSG TPTTGTPTTG 
       130        140        150        160        170        180 
TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF 
       190        200        210        220    
PGTTLGPTGS GGLGDPNAGE KLSVRTNTVV FLLTGVAAML VI



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Physiological Relevance:


Evidence Codes:


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Biological System:


Protease Assignment Confidence:


Evidence Names:


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Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q93V72-20-unknown AYCLCK... 20 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q93V72-165-unknown MPNSNG... 165 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt73499

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...AMLVI 222 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...AMLVI 222 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt69117

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)