TopFIND 4.0

Q93ZV7: La protein 1

General Information

Protein names
- La protein 1
- AtLa1
Gene names LA1
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q93ZV7

1

N-termini

2

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSIPCLTEET AKTVLRQVEF YFSDSNLPID DFLKKTVTES EDGLVSLALI CSFSKMRGYL 
        70         80         90        100        110        120 
KLGDSKGDDI PEDTIKAVAD TLRTSSALKI SDDGKKVGRS TELLKLEDLI EQLNARTVAA 
       130        140        150        160        170        180 
SPFSYDVKRE DVESFFSQYG KVNSVRMPRH VAESRIFSGV ALVEFPTEED AQNVMKQNLV 
       190        200        210        220        230        240 
FAGQELELKP KKEFDNEREK DEVKFANYQP QKGSANQKNG SDHKNNSAYE PDYPKGLIIS 
       250        260        270        280        290        300 
FTLKRSAEEG TTEQKSSEEP TDKTMEESET KPADTPDADK ENTGEVQAEG AEDEDDEKEE 
       310        320        330        340        350        360 
KGALATHKDN KDVVLREDLK AVFGKFGDVK FVDFKMGSET GYLRFDEPEA SQKARAAAVL 
       370        380        390        400        410        420 
ANEGGLAVKN FIAVLEPVIG EAEKEYWTLL RSKDRFDKGG RGGRGGRRGG RFGRKRGSDS 
       430    
PGGRWNKSQK VEA

Isoforms

- Isoform 2 of La protein 1

Sequence View

        10         20         30         40         50         60 
MSIPCLTEET AKTVLRQVEF YFSDSNLPID DFLKKTVTES EDGLVSLALI CSFSKMRGYL 
        70         80         90        100        110        120 
KLGDSKGDDI PEDTIKAVAD TLRTSSALKI SDDGKKVGRS TELLKLEDLI EQLNARTVAA 
       130        140        150        160        170        180 
SPFSYDVKRE DVESFFSQYG KVNSVRMPRH VAESRIFSGV ALVEFPTEED AQNVMKQNLV 
       190        200        210        220        230        240 
FAGQELELKP KKEFDNEREK DEVKFANYQP QKGSANQKNG SDHKNNSAYE PDYPKGLIIS 
       250        260        270        280        290        300 
FTLKRSAEEG TTEQKSSEEP TDKTMEESET KPADTPDADK ENTGEVQAEG AEDEDDEKEE 
       310        320        330        340        350        360 
KGALATHKDN KDVVLREDLK AVFGKFGDVK FVDFKMGSET GYLRFDEPEA SQKARAAAVL 
       370        380        390        400        410        420 
ANEGGLAVKN FIAVLEPVIG EAEKEYWTLL RSKDRFDKGG RGGRGGRRGG RFGRKRGSDS 
       430    
PGGRWNKSQK VEA



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Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

1 N-termini - 2 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q93ZV7-1-unknown MSIPCL... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q93ZV7-1-unknown MSIPCL... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt79314

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...GRGGRG 404 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt74932
    ...QKVEA 433 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)