TopFIND 4.0

Q941D1: High mobility group B protein 12

General Information

Protein names
- High mobility group B protein 12
- Nucleosome/chromatin assembly factor group D 12
Gene names HMGB12
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q941D1

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSGASSEDSS IFARCEDVDC NKKIPVELVR MHICYAMFHR TLAARGFGTQ TQAKKKPTNK 
        70         80         90        100        110        120 
KKSTTSLTDF AVFMNHFRKS FRTDYNGALV KEGSKIGWEM WKSMTEDEKK DYLDKAADEE 
       130        140    
DEDEDTVEEQ ADDSDDAEDN EVKETDDDN

Isoforms

- Isoform 2 of High mobility group B protein 12

Sequence View

        10         20         30         40         50         60 
MSGASSEDSS IFARCEDVDC NKKIPVELVR MHICYAMFHR TLAARGFGTQ TQAKKKPTNK 
        70         80         90        100        110        120 
KKSTTSLTDF AVFMNHFRKS FRTDYNGALV KEGSKIGWEM WKSMTEDEKK DYLDKAADEE 
       130        140    
DEDEDTVEEQ ADDSDDAEDN EVKETDDDN



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Protease Assignment Confidence:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q941D1-1-unknown MSGASS... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q941D1-1-unknown MSGASS... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt77075

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...TDDDN 149 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...TDDDN 149 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt72693

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)