TopFIND 4.0

Q94A38: La-related protein 6A

General Information

Protein names
- La-related protein 6A
- AtLARP6a
Gene names LARP6A
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q94A38

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSSLPLRSGE KMESPSISDA VPLHAPEDAT ADFSQPQSPL HEVDSFPVTE SSDDVVVNVS 
        70         80         90        100        110        120 
EIPNLSPSDD DFDHERNSGE DRDQDHGENP VETDGVVVPI DELNQKIIRQ VEYYFSDENL 
       130        140        150        160        170        180 
PTDKFLLNAM KRNKKGFVPI STIATFHKMK KLTRDHALIV SALKESSFLV VSADEKKVKR 
       190        200        210        220        230        240 
LSPLPEIRDP KIFTVLVENL PEDHSNENIR EIFGKAGSIK SVSICDPNAV EESEKGGKKE 
       250        260        270        280        290        300 
NFIRTRLHAF VEYETVEAAE KAAATLNNEQ DWRNGLRVKL LEQAAGKFAQ RRPARREVDK 
       310        320        330        340        350        360 
EKDTTGRVHD QTGGEKNKKT REHQNHRLHH SDNPADDDGG NHQKDKNGNK GRVVGQGRRQ 
       370        380        390        400        410        420 
NHQGGNGIGH GTASSSSHPN YHPVEVSKRP PGPRMPDGTR GFTMGRGKAI PPPTSTQTSH 
   
EV

Isoforms

- Isoform 2 of La-related protein 6A - Isoform 3 of La-related protein 6A

Sequence View

        10         20         30         40         50         60 
MSSLPLRSGE KMESPSISDA VPLHAPEDAT ADFSQPQSPL HEVDSFPVTE SSDDVVVNVS 
        70         80         90        100        110        120 
EIPNLSPSDD DFDHERNSGE DRDQDHGENP VETDGVVVPI DELNQKIIRQ VEYYFSDENL 
       130        140        150        160        170        180 
PTDKFLLNAM KRNKKGFVPI STIATFHKMK KLTRDHALIV SALKESSFLV VSADEKKVKR 
       190        200        210        220        230        240 
LSPLPEIRDP KIFTVLVENL PEDHSNENIR EIFGKAGSIK SVSICDPNAV EESEKGGKKE 
       250        260        270        280        290        300 
NFIRTRLHAF VEYETVEAAE KAAATLNNEQ DWRNGLRVKL LEQAAGKFAQ RRPARREVDK 
       310        320        330        340        350        360 
EKDTTGRVHD QTGGEKNKKT REHQNHRLHH SDNPADDDGG NHQKDKNGNK GRVVGQGRRQ 
       370        380        390        400        410        420 
NHQGGNGIGH GTASSSSHPN YHPVEVSKRP PGPRMPDGTR GFTMGRGKAI PPPTSTQTSH 
   
EV         10         20         30         40         50         60 
MSSLPLRSGE KMESPSISDA VPLHAPEDAT ADFSQPQSPL HEVDSFPVTE SSDDVVVNVS 
        70         80         90        100        110        120 
EIPNLSPSDD DFDHERNSGE DRDQDHGENP VETDGVVVPI DELNQKIIRQ VEYYFSDENL 
       130        140        150        160        170        180 
PTDKFLLNAM KRNKKGFVPI STIATFHKMK KLTRDHALIV SALKESSFLV VSADEKKVKR 
       190        200        210        220        230        240 
LSPLPEIRDP KIFTVLVENL PEDHSNENIR EIFGKAGSIK SVSICDPNAV EESEKGGKKE 
       250        260        270        280        290        300 
NFIRTRLHAF VEYETVEAAE KAAATLNNEQ DWRNGLRVKL LEQAAGKFAQ RRPARREVDK 
       310        320        330        340        350        360 
EKDTTGRVHD QTGGEKNKKT REHQNHRLHH SDNPADDDGG NHQKDKNGNK GRVVGQGRRQ 
       370        380        390        400        410        420 
NHQGGNGIGH GTASSSSHPN YHPVEVSKRP PGPRMPDGTR GFTMGRGKAI PPPTSTQTSH 
   
EV



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Evidence Codes:


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Biological System:


Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q94A38-1-unknown MSSLPL... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q94A38-1-unknown MSSLPL... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt79960
    Q94A38-1-unknown MSSLPL... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt79961

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...TSHEV 422 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)