TopFIND 4.0

Q94FT2: F-box protein SKIP5

General Information

Protein names
- F-box protein SKIP5
- SKP1-interacting partner 5
Gene names SKIP5
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q94FT2

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MELHEISKLD NKKHPERIVE SKMKKRMKPY SLTSLNNLDD GCLMHILSFL SPIPDRYNTA 
        70         80         90        100        110        120 
LVCHRWRYLA CHPRLWLRVD RFVKDLSQPG VFLNIESAVS AARPGDTILI VAGGNYRVSN 
       130        140        150        160        170        180 
IQIKKPLCLV GGGEIPDETT LVCARGSDSA LELLSTCKLA NLTVKAELGC CLLHRSGRLT 
       190        200        210        220        230        240 
IDGCVLQCET NPLDHLSCPI VSTAGDEDIE NILSHVEVKE TVTGKIKANS VTVLQTRIEG 
       250        260        270    
GAKAVSTRGD LVLQRVRVMY SKAYLYFWFD VDYE

Isoforms

- Isoform 2 of F-box protein SKIP5 - Isoform 3 of F-box protein SKIP5

Sequence View

        10         20         30         40         50         60 
MELHEISKLD NKKHPERIVE SKMKKRMKPY SLTSLNNLDD GCLMHILSFL SPIPDRYNTA 
        70         80         90        100        110        120 
LVCHRWRYLA CHPRLWLRVD RFVKDLSQPG VFLNIESAVS AARPGDTILI VAGGNYRVSN 
       130        140        150        160        170        180 
IQIKKPLCLV GGGEIPDETT LVCARGSDSA LELLSTCKLA NLTVKAELGC CLLHRSGRLT 
       190        200        210        220        230        240 
IDGCVLQCET NPLDHLSCPI VSTAGDEDIE NILSHVEVKE TVTGKIKANS VTVLQTRIEG 
       250        260        270    
GAKAVSTRGD LVLQRVRVMY SKAYLYFWFD VDYE         10         20         30         40         50         60 
MELHEISKLD NKKHPERIVE SKMKKRMKPY SLTSLNNLDD GCLMHILSFL SPIPDRYNTA 
        70         80         90        100        110        120 
LVCHRWRYLA CHPRLWLRVD RFVKDLSQPG VFLNIESAVS AARPGDTILI VAGGNYRVSN 
       130        140        150        160        170        180 
IQIKKPLCLV GGGEIPDETT LVCARGSDSA LELLSTCKLA NLTVKAELGC CLLHRSGRLT 
       190        200        210        220        230        240 
IDGCVLQCET NPLDHLSCPI VSTAGDEDIE NILSHVEVKE TVTGKIKANS VTVLQTRIEG 
       250        260        270    
GAKAVSTRGD LVLQRVRVMY SKAYLYFWFD VDYE



Filter Information:


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Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q94FT2-1-unknown MELHEI... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q94FT2-1-unknown MELHEI... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt89835
    Q94FT2-1-unknown MELHEI... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt89836

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...DVDYE 274 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)