TopFIND 4.0

Q99JR8: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2

General Information

Protein names
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
- 60 kDa BRG-1/Brm-associated factor subunit B
- BRG1-associated factor 60B
- BAF60B
Gene names Smarcd2
Organism Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID Q99JR8

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSGRGAGGFP LPPLSPGGGA VAAALGAPPP PAGPGMLPSP ALRGPGPSGG MGVPGAAAFR 
        70         80         90        100        110        120 
PMGPAGPAAQ YQRPGMSPGS RMPMAGLQVG PPAGSPFGTA APLRPGMPPT MMDPFRKRLL 
       130        140        150        160        170        180 
VPQAQPPMPA QRRGLKRRKM ADKVLPQRIR ELVPESQAYM DLLAFERKLD QTIARKRMEI 
       190        200        210        220        230        240 
QEAIKKPLTQ KRKLRIYISN TFSPSKADGD NAGTAGTPGG TPAADKVASW ELRVEGKLLD 
       250        260        270        280        290        300 
DPSKQKRKFS SFFKSLVIEL DKELYGPDNH LVEWHRMPTT QETDGFQVKR PGDLNVKCTL 
       310        320        330        340        350        360 
LLMLDHQPPQ YKLDPRLARL LGVHTQTRAA IMQALWLYIK HNQLQDGHER EYINCNRYFR 
       370        380        390        400        410        420 
QIFSCGRLRF SEIPMKLAGL LQHPDPIVIN HVISVDPNDQ KKTACYDIDV EVDDPLKAQM 
       430        440        450        460        470        480 
SNFLASTTNQ QEIASLDVKI HETIESINQL KTQRDFMLSF STEPQDFIQE WLRSQRRDLK 
       490        500        510        520        530    
IITDVIGNPE EERRAAFYHQ PWAQEAVGRH IFAKVQQRRQ ELEQVLGIRL T

Isoforms

- Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2

Sequence View

        10         20         30         40         50         60 
MSGRGAGGFP LPPLSPGGGA VAAALGAPPP PAGPGMLPSP ALRGPGPSGG MGVPGAAAFR 
        70         80         90        100        110        120 
PMGPAGPAAQ YQRPGMSPGS RMPMAGLQVG PPAGSPFGTA APLRPGMPPT MMDPFRKRLL 
       130        140        150        160        170        180 
VPQAQPPMPA QRRGLKRRKM ADKVLPQRIR ELVPESQAYM DLLAFERKLD QTIARKRMEI 
       190        200        210        220        230        240 
QEAIKKPLTQ KRKLRIYISN TFSPSKADGD NAGTAGTPGG TPAADKVASW ELRVEGKLLD 
       250        260        270        280        290        300 
DPSKQKRKFS SFFKSLVIEL DKELYGPDNH LVEWHRMPTT QETDGFQVKR PGDLNVKCTL 
       310        320        330        340        350        360 
LLMLDHQPPQ YKLDPRLARL LGVHTQTRAA IMQALWLYIK HNQLQDGHER EYINCNRYFR 
       370        380        390        400        410        420 
QIFSCGRLRF SEIPMKLAGL LQHPDPIVIN HVISVDPNDQ KKTACYDIDV EVDDPLKAQM 
       430        440        450        460        470        480 
SNFLASTTNQ QEIASLDVKI HETIESINQL KTQRDFMLSF STEPQDFIQE WLRSQRRDLK 
       490        500        510        520        530    
IITDVIGNPE EERRAAFYHQ PWAQEAVGRH IFAKVQQRRQ ELEQVLGIRL T



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q99JR8-1-unknown MSGRGA... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...GIRLT 531 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...GIRLT 531 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt85707

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)