TopFIND 4.0

Q9C9I6: Pentatricopeptide repeat-containing protein At1g71490

General Information

Protein names
- Pentatricopeptide repeat-containing protein At1g71490
Gene names PCMP-E67
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9C9I6

1

N-termini

2

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MLSESLFKSL GHLASHGHLH DAFKTFSLLR LQSSSAVSDD LVLHSAASLL SACVDVRAFL 
        70         80         90        100        110        120 
AGVQVHAHCI SSGVEYHSVL VPKLVTFYSA FNLHNEAQSI IENSDILHPL PWNVLIASYA 
       130        140        150        160        170        180 
KNELFEEVIA AYKRMVSKGI RPDAFTYPSV LKACGETLDV AFGRVVHGSI EVSSYKSSLY 
       190        200        210        220        230        240 
VCNALISMYK RFRNMGIARR LFDRMFERDA VSWNAVINCY ASEGMWSEAF ELFDKMWFSG 
       250        260        270        280        290        300 
VEVSVITWNI ISGGCLQTGN YVGALGLISR MRNFPTSLDP VAMIIGLKAC SLIGAIRLGK 
       310        320        330        340        350        360 
EIHGLAIHSS YDGIDNVRNT LITMYSKCKD LRHALIVFRQ TEENSLCTWN SIISGYAQLN 
       370        380        390        400        410        420 
KSEEASHLLR EMLVAGFQPN SITLASILPL CARIANLQHG KEFHCYILRR KCFKDYTMLW 
       430        440        450        460        470        480 
NSLVDVYAKS GKIVAAKQVS DLMSKRDEVT YTSLIDGYGN QGEGGVALAL FKEMTRSGIK 
       490        500        510        520        530        540 
PDHVTVVAVL SACSHSKLVH EGERLFMKMQ CEYGIRPCLQ HFSCMVDLYG RAGFLAKAKD 
       550        560        570        580        590        600 
IIHNMPYKPS GATWATLLNA CHIHGNTQIG KWAAEKLLEM KPENPGYYVL IANMYAAAGS 
       610        620        630        640        650        660 
WSKLAEVRTI MRDLGVKKDP GCAWIDTDSG FSLFSVGDTS SPEACNTYPL LDGLNQLMKD 
       670        680    
NAGYAINKVQ SSDEELLQEM G

Isoforms

- Isoform 2 of Pentatricopeptide repeat-containing protein At1g71490

Sequence View

        10         20         30         40         50         60 
MLSESLFKSL GHLASHGHLH DAFKTFSLLR LQSSSAVSDD LVLHSAASLL SACVDVRAFL 
        70         80         90        100        110        120 
AGVQVHAHCI SSGVEYHSVL VPKLVTFYSA FNLHNEAQSI IENSDILHPL PWNVLIASYA 
       130        140        150        160        170        180 
KNELFEEVIA AYKRMVSKGI RPDAFTYPSV LKACGETLDV AFGRVVHGSI EVSSYKSSLY 
       190        200        210        220        230        240 
VCNALISMYK RFRNMGIARR LFDRMFERDA VSWNAVINCY ASEGMWSEAF ELFDKMWFSG 
       250        260        270        280        290        300 
VEVSVITWNI ISGGCLQTGN YVGALGLISR MRNFPTSLDP VAMIIGLKAC SLIGAIRLGK 
       310        320        330        340        350        360 
EIHGLAIHSS YDGIDNVRNT LITMYSKCKD LRHALIVFRQ TEENSLCTWN SIISGYAQLN 
       370        380        390        400        410        420 
KSEEASHLLR EMLVAGFQPN SITLASILPL CARIANLQHG KEFHCYILRR KCFKDYTMLW 
       430        440        450        460        470        480 
NSLVDVYAKS GKIVAAKQVS DLMSKRDEVT YTSLIDGYGN QGEGGVALAL FKEMTRSGIK 
       490        500        510        520        530        540 
PDHVTVVAVL SACSHSKLVH EGERLFMKMQ CEYGIRPCLQ HFSCMVDLYG RAGFLAKAKD 
       550        560        570        580        590        600 
IIHNMPYKPS GATWATLLNA CHIHGNTQIG KWAAEKLLEM KPENPGYYVL IANMYAAAGS 
       610        620        630        640        650        660 
WSKLAEVRTI MRDLGVKKDP GCAWIDTDSG FSLFSVGDTS SPEACNTYPL LDGLNQLMKD 
       670        680    
NAGYAINKVQ SSDEELLQEM G



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Protein Neighborhood

Domains & Features

1 N-termini - 2 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9C9I6-1-unknown MLSESL... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9C9I6-1-unknown MLSESL... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt85824

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...HGSIEV 171 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt81442
    ...LQEMG 681 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)