TopFIND 4.0

Q9CAN6: Pentatricopeptide repeat-containing protein At1g63070, mitochondrial

General Information

Protein names
- Pentatricopeptide repeat-containing protein At1g63070, mitochondrial
Gene names
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9CAN6

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MMRSVAVIGK KCLHRHTVLL KGNPRTTLCW ERSFAGASSD DCRENLSRKV LQDLKLDDAI 
        70         80         90        100        110        120 
GLFGDMVKSR PFPSIVEFSK LLSAIAKMNK FDLVISLGEQ MQNLGISHNL YTYSIFINYF 
       130        140        150        160        170        180 
CRRSQLSLAL AILGKMMKLG YGPSIVTLNS LLNGFCHGNR ISEAVALVDQ MVEMGYQPDT 
       190        200        210        220        230        240 
VTFTTLVHGL FQHNKASEAV ALVERMVVKG CQPDLVTYGA VINGLCKRGE PDLALNLLNK 
       250        260        270        280        290        300 
MEKGKIEADV VIYNTIIDGL CKYKHMDDAF DLFNKMETKG IKPDVFTYNP LISCLCNYGR 
       310        320        330        340        350        360 
WSDASRLLSD MLEKNINPDL VFFNALIDAF VKEGKLVEAE KLYDEMVKSK HCFPDVVAYN 
       370        380        390        400        410        420 
TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYTTLIHG FFQARDCDNA QMVFKQMVSD 
       430        440        450        460        470        480 
GVHPDIMTYN ILLDGLCNNG NVETALVVFE YMQKRDMKLD IVTYTTMIEA LCKAGKVEDG 
       490        500        510        520        530        540 
WDLFCSLSLK GVKPNVVTYT TMMSGFCRKG LKEEADALFV EMKEDGPLPN SGTYNTLIRA 
       550        560        570        580        590    
RLRDGDEAAS AELIKEMRSC GFAGDASTFG LVTNMLHDGR LDKSFLDMLS 

Isoforms

- Isoform 2 of Pentatricopeptide repeat-containing protein At1g63070, mitochondrial

Sequence View

        10         20         30         40         50         60 
MMRSVAVIGK KCLHRHTVLL KGNPRTTLCW ERSFAGASSD DCRENLSRKV LQDLKLDDAI 
        70         80         90        100        110        120 
GLFGDMVKSR PFPSIVEFSK LLSAIAKMNK FDLVISLGEQ MQNLGISHNL YTYSIFINYF 
       130        140        150        160        170        180 
CRRSQLSLAL AILGKMMKLG YGPSIVTLNS LLNGFCHGNR ISEAVALVDQ MVEMGYQPDT 
       190        200        210        220        230        240 
VTFTTLVHGL FQHNKASEAV ALVERMVVKG CQPDLVTYGA VINGLCKRGE PDLALNLLNK 
       250        260        270        280        290        300 
MEKGKIEADV VIYNTIIDGL CKYKHMDDAF DLFNKMETKG IKPDVFTYNP LISCLCNYGR 
       310        320        330        340        350        360 
WSDASRLLSD MLEKNINPDL VFFNALIDAF VKEGKLVEAE KLYDEMVKSK HCFPDVVAYN 
       370        380        390        400        410        420 
TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYTTLIHG FFQARDCDNA QMVFKQMVSD 
       430        440        450        460        470        480 
GVHPDIMTYN ILLDGLCNNG NVETALVVFE YMQKRDMKLD IVTYTTMIEA LCKAGKVEDG 
       490        500        510        520        530        540 
WDLFCSLSLK GVKPNVVTYT TMMSGFCRKG LKEEADALFV EMKEDGPLPN SGTYNTLIRA 
       550        560        570        580        590    
RLRDGDEAAS AELIKEMRSC GFAGDASTFG LVTNMLHDGR LDKSFLDMLS 



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Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


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Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9CAN6-1-unknown MMRSVA... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt86032
    Q9CAN6-35-unknown AGASSD... 35 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9CAN6-35-unknown AGASSD... 35 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt115243

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...LDMLS 590 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)