TopFIND 4.0

Q9CY66: H/ACA ribonucleoprotein complex subunit 1

General Information

Protein names
- H/ACA ribonucleoprotein complex subunit 1
- Nucleolar protein family A member 1
- snoRNP protein GAR1
Gene names Gar1
Organism Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID Q9CY66

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSFRGGGRGG FNRGGGGGGF NRGGGSNNHF RGGGGGGGGS FRGGGGGGGG SFRGGGRGGF 
        70         80         90        100        110        120 
GRGGGRGGFN KFQDQGPPER VVLLGEFMHP CEDDIVCKCT TEENKVPYFN APVYLENKEQ 
       130        140        150        160        170        180 
VGKVDEIFGQ LRDFYFSVKL SENMKASSFK KLQKFYIDPY KLLPLQRFLP RPPGEKGPPR 
       190        200        210        220        230    
GGGGGGRGGR GGGRGGGGRG GGRGGGFRGG RGGGGGFRGG RGGGGFRGRG H

Isoforms

- Isoform 2 of H/ACA ribonucleoprotein complex subunit 1 - Isoform 3 of H/ACA ribonucleoprotein complex subunit 1

Sequence View

        10         20         30         40         50         60 
MSFRGGGRGG FNRGGGGGGF NRGGGSNNHF RGGGGGGGGS FRGGGGGGGG SFRGGGRGGF 
        70         80         90        100        110        120 
GRGGGRGGFN KFQDQGPPER VVLLGEFMHP CEDDIVCKCT TEENKVPYFN APVYLENKEQ 
       130        140        150        160        170        180 
VGKVDEIFGQ LRDFYFSVKL SENMKASSFK KLQKFYIDPY KLLPLQRFLP RPPGEKGPPR 
       190        200        210        220        230    
GGGGGGRGGR GGGRGGGGRG GGRGGGFRGG RGGGGGFRGG RGGGGFRGRG H         10         20         30         40         50         60 
MSFRGGGRGG FNRGGGGGGF NRGGGSNNHF RGGGGGGGGS FRGGGGGGGG SFRGGGRGGF 
        70         80         90        100        110        120 
GRGGGRGGFN KFQDQGPPER VVLLGEFMHP CEDDIVCKCT TEENKVPYFN APVYLENKEQ 
       130        140        150        160        170        180 
VGKVDEIFGQ LRDFYFSVKL SENMKASSFK KLQKFYIDPY KLLPLQRFLP RPPGEKGPPR 
       190        200        210        220        230    
GGGGGGRGGR GGGRGGGGRG GGRGGGFRGG RGGGGGFRGG RGGGGFRGRG H



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9CY66-1-unknown MSFRGG... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9CY66-1-unknown MSFRGG... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt75708
    Q9CY66-1-unknown MSFRGG... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt75709

C-termini

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)