TopFIND 4.0

Q9DBN9: Probable ATP-dependent RNA helicase DDX59

General Information

Protein names
- Probable ATP-dependent RNA helicase DDX59
- 3.6.4.13
- DEAD box protein 59
Gene names Ddx59
Organism Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID Q9DBN9

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MFVPRSLKIK RSSNDDLKSG EAKKSKPEAG GLQVEGDRDT PVHTSVTEEA VTADKPGHAS 
        70         80         90        100        110        120 
STNSPSCQLA EVSSTGPDEG VKDSHPSEEP VKSFSKTQRW PEPGEPVCVV CGRYGEYICD 
       130        140        150        160        170        180 
KTDEDVCSLE CKAKHLLQVK EGEGSLRPSS PQRVAAEPES PLDAFYVYKE HPFIVTLKED 
       190        200        210        220        230        240 
QIETLKQQLG ISVQGQDVAR PIIDFEHCGF PETLNQNLKK SGYEVPTPIQ MQMIPVGLLG 
       250        260        270        280        290        300 
RDILASADTG SGKTAAFLLP VIIRAFSEDK TPSALILTPT RELAIQIERQ AKELMSGLPR 
       310        320        330        340        350        360 
MKTVLLVGGL PLPPQLYRLR QHVKVIIATP GRLLDIIKQS SVSLSGIKIV VVDEADTMLK 
       370        380        390        400        410        420 
MGFQQQVLDV LEHTPGDCQT ILVSATIPDS IEQLTDQLLH NPVRIITGDK NLPCASVRQI 
       430        440        450        460        470        480 
ILWVEDPAKK KKLFEILNDQ KLFKPPVLVF VDCKLGADLL SEAVQKITGL NSTSIHSEKS 
       490        500        510        520        530        540 
QVERRDILKG LLEGDYEVVV STGVLGRGLD LVNVKLVVNF DMPSSMDEYV HQVGRVGRLG 
       550        560        570        580        590        600 
QNGTAITFIN NNSKRLFWDV AKRVKPTGSI LPPQLLNSPY LHEQKRKEQQ KDRQTQNSLV 
       610    
TGANLMDIIR KHEKSSSQK

Isoforms

- Isoform 2 of Probable ATP-dependent RNA helicase DDX59

Sequence View

        10         20         30         40         50         60 
MFVPRSLKIK RSSNDDLKSG EAKKSKPEAG GLQVEGDRDT PVHTSVTEEA VTADKPGHAS 
        70         80         90        100        110        120 
STNSPSCQLA EVSSTGPDEG VKDSHPSEEP VKSFSKTQRW PEPGEPVCVV CGRYGEYICD 
       130        140        150        160        170        180 
KTDEDVCSLE CKAKHLLQVK EGEGSLRPSS PQRVAAEPES PLDAFYVYKE HPFIVTLKED 
       190        200        210        220        230        240 
QIETLKQQLG ISVQGQDVAR PIIDFEHCGF PETLNQNLKK SGYEVPTPIQ MQMIPVGLLG 
       250        260        270        280        290        300 
RDILASADTG SGKTAAFLLP VIIRAFSEDK TPSALILTPT RELAIQIERQ AKELMSGLPR 
       310        320        330        340        350        360 
MKTVLLVGGL PLPPQLYRLR QHVKVIIATP GRLLDIIKQS SVSLSGIKIV VVDEADTMLK 
       370        380        390        400        410        420 
MGFQQQVLDV LEHTPGDCQT ILVSATIPDS IEQLTDQLLH NPVRIITGDK NLPCASVRQI 
       430        440        450        460        470        480 
ILWVEDPAKK KKLFEILNDQ KLFKPPVLVF VDCKLGADLL SEAVQKITGL NSTSIHSEKS 
       490        500        510        520        530        540 
QVERRDILKG LLEGDYEVVV STGVLGRGLD LVNVKLVVNF DMPSSMDEYV HQVGRVGRLG 
       550        560        570        580        590        600 
QNGTAITFIN NNSKRLFWDV AKRVKPTGSI LPPQLLNSPY LHEQKRKEQQ KDRQTQNSLV 
       610    
TGANLMDIIR KHEKSSSQK



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Evidence Codes:


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Protease Assignment Confidence:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9DBN9-1-unknown MFVPRS... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9DBN9-1-unknown MFVPRS... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt72559

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...SSSQK 619 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)