TopFIND 4.0

Q9EQ10: PCNA-interacting partner

General Information

Protein names
- PCNA-interacting partner
- PARI
- Antisense RNA overlapping MCH gene protein
- AROM
- PARP-1 binding protein
- PARP1-binding protein
- PARPBP
Gene names Parpbp
Organism Rattus norvegicus
Protease Family
Protease ID
Chromosome location
UniProt ID Q9EQ10

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MAVLNQMSVL DMIKAFRRNW RAHCNSERTT LCGPDSMLLA LQLSMAENNK QHHGEFTVCL 
        70         80         90        100        110        120 
SDVLLTWKYF LHEKLNLPIE NMKVVDHYED IRKTYDDFLK NSNTLDLIDV YKKCSIMTSN 
       130        140        150        160        170        180 
CEKHMISSIQ LRDFLSGTEC AVNDENNPHS PASPVKCSQN DKQVRLLAKK IFLSYLSLLV 
       190        200        210        220        230        240 
NSKNDLALAQ ILNTPDRGLG REAFTNLKHA AREKQLSMFL MATSFIRTLE LGGKGYAPPP 
       250        260        270        280        290        300 
SDPLWAHVKG LSAFVNFIDK LNEILGEVPN PSLAGGRILS AIRTQLIKGH SSGEPFYKAV 
       310        320        330        340        350        360 
EEVVQDLNLR IKNIINSQEG VTVSATNISP VPPKSFAINH DTAYCGRDAV KILLVLLDED 
       370        380        390        400        410        420 
AASAPTRNKA ELLYNDQSTA PHGGASVLTL FRSPTQVKST PVKPLRERIH TSLQAEKNKQ 
       430        440        450        460        470        480 
MRQTLIRSQF ACTYKDDCIM SKSKWNVNSS SKPLSALRLE NDVSEGAQPS VGKARLETSS 
       490        500        510        520        530        540 
ENVHVDRSKD DKGPRKSTKR KLAKSKQPGV REDIHCDQGD ELYQPKNVKI LKVPSDSHRK 
       550        560        570    
AGGKLAPGAR GNRCTTKDKL IPGQTKLTRF FML

Isoforms

- Isoform 2 of PCNA-interacting partner

Sequence View

        10         20         30         40         50         60 
MAVLNQMSVL DMIKAFRRNW RAHCNSERTT LCGPDSMLLA LQLSMAENNK QHHGEFTVCL 
        70         80         90        100        110        120 
SDVLLTWKYF LHEKLNLPIE NMKVVDHYED IRKTYDDFLK NSNTLDLIDV YKKCSIMTSN 
       130        140        150        160        170        180 
CEKHMISSIQ LRDFLSGTEC AVNDENNPHS PASPVKCSQN DKQVRLLAKK IFLSYLSLLV 
       190        200        210        220        230        240 
NSKNDLALAQ ILNTPDRGLG REAFTNLKHA AREKQLSMFL MATSFIRTLE LGGKGYAPPP 
       250        260        270        280        290        300 
SDPLWAHVKG LSAFVNFIDK LNEILGEVPN PSLAGGRILS AIRTQLIKGH SSGEPFYKAV 
       310        320        330        340        350        360 
EEVVQDLNLR IKNIINSQEG VTVSATNISP VPPKSFAINH DTAYCGRDAV KILLVLLDED 
       370        380        390        400        410        420 
AASAPTRNKA ELLYNDQSTA PHGGASVLTL FRSPTQVKST PVKPLRERIH TSLQAEKNKQ 
       430        440        450        460        470        480 
MRQTLIRSQF ACTYKDDCIM SKSKWNVNSS SKPLSALRLE NDVSEGAQPS VGKARLETSS 
       490        500        510        520        530        540 
ENVHVDRSKD DKGPRKSTKR KLAKSKQPGV REDIHCDQGD ELYQPKNVKI LKVPSDSHRK 
       550        560        570    
AGGKLAPGAR GNRCTTKDKL IPGQTKLTRF FML



Filter Information:


(REFRESH)

Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9EQ10-1-unknown MAVLNQ... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9EQ10-82-unknown MKVVDH... 82 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt193232

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...RFFML 573 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...RFFML 573 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt153178

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)