TopFIND 4.0

Q9FIF7: Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic

General Information

Protein names
- Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic
- Protein ORGANELLE TRANSCRIPT PROCESSING 80 {ECO:0000303|PubMed:19934379}
Gene names PCMP-E41
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9FIF7

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MISSLAAITG GPSTFRRDPD SNTLRLSRRK TLISVLRSCK NIAHVPSIHA KIIRTFHDQD 
        70         80         90        100        110        120 
AFVVFELIRV CSTLDSVDYA YDVFSYVSNP NVYLYTAMID GFVSSGRSAD GVSLYHRMIH 
       130        140        150        160        170        180 
NSVLPDNYVI TSVLKACDLK VCREIHAQVL KLGFGSSRSV GLKMMEIYGK SGELVNAKKM 
       190        200        210        220        230        240 
FDEMPDRDHV AATVMINCYS ECGFIKEALE LFQDVKIKDT VCWTAMIDGL VRNKEMNKAL 
       250        260        270        280        290        300 
ELFREMQMEN VSANEFTAVC VLSACSDLGA LELGRWVHSF VENQRMELSN FVGNALINMY 
       310        320        330        340        350        360 
SRCGDINEAR RVFRVMRDKD VISYNTMISG LAMHGASVEA INEFRDMVNR GFRPNQVTLV 
       370        380        390        400        410        420 
ALLNACSHGG LLDIGLEVFN SMKRVFNVEP QIEHYGCIVD LLGRVGRLEE AYRFIENIPI 
       430        440        450        460        470        480 
EPDHIMLGTL LSACKIHGNM ELGEKIAKRL FESENPDSGT YVLLSNLYAS SGKWKESTEI 
       490        500        510        520        530        540 
RESMRDSGIE KEPGCSTIEV DNQIHEFLVG DIAHPHKEAI YQRLQELNRI LRFKENQIDI 
   
IMGF

Isoforms



Sequence View



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Protease Assignment Confidence:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9FIF7-26-unknown LSRRKT... 26 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...IIMGF 544 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)